Gene Ava_D0033 details

Gene Information

• Locus tag: Ava_D0033
• ID: 8952420
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anabaena variabilis ATCC 29413
• Kingdom: Bacteria
• Replicon accession: NC_014000
• Strand: +
• Start bp: 22354
• End bp: 24309
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 50%
• Product: hypothetical protein
• Protein accession: YP_003541156
• Protein GI: 292905285

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.417677
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCAAG TCAGGCGTGA TACTAATCGC GGTACTGGGG TATGGAGTGG GGTGGTTCAG 
ATAGCAGCAG CCCACACTTT GATTATTGTG GGGCTGTATG AGCCAAGTGT CTTGTTGCCC 
ACCACGGCTA TTGGATTTTT TATTTCATCT TGGGTACTGG GAAAATTTCC AAATCCCTTA 
CCCAGAAAGA ATGAACTCAT TGCCGCAGCG CACCGGGAAA ATTGGCGGAC ATCGGCTTTA 
ACCGAGGTGG AAAAATCGGC TCAGTCTAGG CTGGAAGAGA TTGAGCAGAA GGCTGGCGTA 
TTGGTAGAGA TGCGATCGCA ACTGCAAACT AAAAGCACTC AGTTGGCGCA ATGGGAACAA 
AATCTATTGC AAGCTGAGGG GAAATTCCGC GAACTGCTGC AACAGACCGA AGACCACTAC 
AAGGAATTAC TGCAACAGCA AGCCGAACAG TACATGGCGG AGATACGGCT GCGGGAAGGG 
ACTATCGTTG GCTTGCAGCA AAAAATCATG AGAATGGCAA ACAGGCCAGA CCCCAAGCAA 
GGGTTCGCGG CCTGGGTTGC TCAAATGCTG CTGGACGCTT TGGAACAAAA CCAAGTTTAC 
TGCCGGATGG TTGCTTTTCA AAAAGTCCCC GGTGTGCGTG AGGTTAGCGT CTGGGTGGAG 
TTGGAACCAA TTGCGGTTGA ACCGGGTTAC GCCCGGAAAC TGGAGGGGTT ATCTAAAGAG 
GTAGCATCGC TGGTAAAGCT GGGTGAGCCG GCTATCCAGT GGGATGAGGA TGAATGTATC 
TGGGAATTTC GCTTTGCTCC CAGATACGAA ACTGAAGAAA GTTTGCTGGC TAACGTCATC 
GACGACCCGA AAGAATTACC CGCCGTCATT GAACCCGATG ACCCCGATTG GTTCCGTCGA 
GCAATTCGTG TTTCCTTCAG CTGCTTAATT CACGGTGGGA TGGGTGCGGG TAAGTCTGTA 
CTGGTAAGTA ACTTAATCTG CTGTGCCAAT CAGGAGTTAG AACAGGTTTA CAGTCTTGCA 
CCAGAACTGG TAATCATTGA CCCGAAATTC CCAGACAGTG AATGGATTAT CGCCGGCAAG 
CGAATCAAAC CAAACTATCG GGGGTGGGAA AATTCCATTA CTGGCGTAGC CGACATGGGA 
CAAGAAGTTG ACCGCCGACT TGATGAAGCC AAAGCGATCG CAGAAGAAAT CGACGAAGAA 
CTATTTGCAG ATCCTAATTA CGTTCTACCC CTGCCAGAAC GTACACCGAC TATCTGGGTG 
ATTGATGAGG CCGCAGCGCT GCATGAGCGA TATGGTAATG AATTTTCCGA ACCACTCAAG 
AATGCTTTTT GGGTCGGTCG TTCAACTCGT AATGTGGCGA TCGCAATTGG CCAAAATCCC 
AACTGCTCTA ACTATGGTTT ACAGCGACCA GACGCAGAAA ATGCCAGCCG CTTTTTCTTG 
GGTGCAGCAA TGGCCTTGAA GGGACTGGAT GAACTCAAAA CCACCAGGGA ACTGAAAACC 
AAACTCAGAC AACAAATATA TGCGCGGTTG GCATTGGTCA GACAAAGGAA GTTGCAAGGT 
ATCGACAAGC CGGAGGAACA ATACTTTGGC TTGGTGGCAA TTCAAAATGA GATGCCATTT 
ATTGCTCAGA TGCCACCACC CAATGCTTTT GCTTTTGACG GCGAGGTGGA ACTGAGGGAA 
GGGGAGGAAA TTGAAACCAT TGAAAACCTT ATTGAACAAG CCGACTGGGA AGAAACGCTA 
CGGGCCCTAC CTGAAGAACT GCGAATCGTG GCTGAATACG CCAAACGCAA GCGGGGGGAT 
TGGGTAACGG CGCGGGACAT TAAGCGCGAT CGCAACCGTG GGAAAATTTC CACCGCATCA 
ACTGAAGAGG TGCGGCAATG GTTCACCCGG TTAGCAGCTA TGGGTATAGG GGAGGTGACG 
GGTGGTGGTA CAGCGCTCAA ATACAAACTG GGATGA 

 

Protein sequence

MAQVRRDTNR GTGVWSGVVQ IAAAHTLIIV GLYEPSVLLP TTAIGFFISS WVLGKFPNPL 
PRKNELIAAA HRENWRTSAL TEVEKSAQSR LEEIEQKAGV LVEMRSQLQT KSTQLAQWEQ 
NLLQAEGKFR ELLQQTEDHY KELLQQQAEQ YMAEIRLREG TIVGLQQKIM RMANRPDPKQ 
GFAAWVAQML LDALEQNQVY CRMVAFQKVP GVREVSVWVE LEPIAVEPGY ARKLEGLSKE 
VASLVKLGEP AIQWDEDECI WEFRFAPRYE TEESLLANVI DDPKELPAVI EPDDPDWFRR 
AIRVSFSCLI HGGMGAGKSV LVSNLICCAN QELEQVYSLA PELVIIDPKF PDSEWIIAGK 
RIKPNYRGWE NSITGVADMG QEVDRRLDEA KAIAEEIDEE LFADPNYVLP LPERTPTIWV 
IDEAAALHER YGNEFSEPLK NAFWVGRSTR NVAIAIGQNP NCSNYGLQRP DAENASRFFL 
GAAMALKGLD ELKTTRELKT KLRQQIYARL ALVRQRKLQG IDKPEEQYFG LVAIQNEMPF 
IAQMPPPNAF AFDGEVELRE GEEIETIENL IEQADWEETL RALPEELRIV AEYAKRKRGD 
WVTARDIKRD RNRGKISTAS TEEVRQWFTR LAAMGIGEVT GGGTALKYKL G