Gene Ava_D0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_D0014 
Symbol 
ID8952401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_014000 
Strand
Start bp10735 
End bp12189 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003541137 
Protein GI292905266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAC GAATCTATAA GCAGTATAGA GAGAAAGCCA GGGAAGCCGC CAGATCAGCG 
ACTATTGCAG CGCGATCGCC CAATGCTCTT AGGGCTTGGA ATGACTTTGC TTACTTTGCT
GAGTATGTAA CGGGAAAAAC GGCAGCAGAG CATCACCTGG AATGGATTAC TGAACTAGTT
ACAGGGATTT CTTCCCAGAC TCTTGAATTA GTCGCGGGGG ACAATCTGAG TATTCTTGCA
CCTAGAGGTA GTGCCAAGAG TACCTGGATT GCTATGTGGG TGGCGTGGGT GATTGGTCAC
AATCCCAGTA TTCAGATTAT TTATGTTTCT TACTCTGAAT CTGTCGCCTT ATCTCGTAGC
CGCATCATCA AGCGAATTAT TGAGAGTCCC AAGTATAGGG AAGTTTTCCC AAATGTATTA
CCGGGTAAAA GGTGGAGTGA TACCGACTGG GAAATTAGAA AGGATTTTGC AGGTGTTGAC
AGCCTGGATT CTGACTACAC CTTTTACGCC ACAGGTATCA CTGGAAGTAT CACCAGCCGC
CGTAGTGATT TGGTGGTCTA CGACGACATT ATTAAGTCTT CTGAATCAAT TGAGAATCCA
GAAGTACGCG AGAAAATTAC CACCAACTAT TCAGAGGTAA TCAGGCCTAC TCTCAAGCCA
GGGGGGAGAC AGGTCAATAT TGGGACTCGC TTCCGTGCCG ATGACATCCA CTGTACTGAT
TTCATTCCGG CGAAGGGATG GAAGCAAATT GTACAGCAGG CAATTGTTGA TGATGATGAC
GGTAAGGAAG TAAGTTACTG GCCGGAACGC TTCACCCTGG AAGAATTGCA AGCACTGAGG
GAAGATAGCC CGGTCGCGTT TAGCTTCCAG TATCAAAACC GGGTAATGCG GAGTTCTGAA
ACCTCCATTG ACCCACTGTG GATCAAGCAT GGTGAATTCC CCGATCATTT TGACTCGCTG
TGTATCGGTG GGGATTTGTC AGCATCACTC AGAGAACGGG CTGATTACAC GGTGTTTGTT
TTGGGTGGTC GAGTTGGCAA CAAGTTTTAC ATTCTCGACA TCCGGCGGGG TCGGTGGAGT
GGGAATATTG AAAAGCTCGA CCAGATTATT GAACTGTGGG CAGACTGGGG AGAGTTGCCA
ATAACACTGT GCGCTGAGGC TGTGGCTTAT CAAAGTTCCT TGAAGGGTGA CTTTACTCAC
TACTTGGTGA ATGAGAAGCA GATTTTTAAT ATTCAATACC AGCAGCCGAC GACTAAAGGG
GATAAGTTGC AGCGACTGCG CGGGGTGTCG GGGTTATTTC AAAATGGGCT AGTTACCTTT
AACCAATACC GGATGATGGG GCGGTTGGTT GATGAACTCA TTAACTTTGG CGCGATGGAT
AAGGATGATT GTGTGGATGC TTTGGTTTAT TGCTTAGTTG GGTTGATGGG TAGACGTAAG
CTTGAGGTTG CGTGA
 
Protein sequence
MATRIYKQYR EKAREAARSA TIAARSPNAL RAWNDFAYFA EYVTGKTAAE HHLEWITELV 
TGISSQTLEL VAGDNLSILA PRGSAKSTWI AMWVAWVIGH NPSIQIIYVS YSESVALSRS
RIIKRIIESP KYREVFPNVL PGKRWSDTDW EIRKDFAGVD SLDSDYTFYA TGITGSITSR
RSDLVVYDDI IKSSESIENP EVREKITTNY SEVIRPTLKP GGRQVNIGTR FRADDIHCTD
FIPAKGWKQI VQQAIVDDDD GKEVSYWPER FTLEELQALR EDSPVAFSFQ YQNRVMRSSE
TSIDPLWIKH GEFPDHFDSL CIGGDLSASL RERADYTVFV LGGRVGNKFY ILDIRRGRWS
GNIEKLDQII ELWADWGELP ITLCAEAVAY QSSLKGDFTH YLVNEKQIFN IQYQQPTTKG
DKLQRLRGVS GLFQNGLVTF NQYRMMGRLV DELINFGAMD KDDCVDALVY CLVGLMGRRK
LEVA