Gene Ava_D0012 details

Gene Information

• Locus tag: Ava_D0012
• ID: 8952399
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anabaena variabilis ATCC 29413
• Kingdom: Bacteria
• Replicon accession: NC_014000
• Strand: -
• Start bp: 7797
• End bp: 9923
• Gene Length: 2127 bp
• Protein Length: 708 aa
• Translation table: 11
• GC content: 49%
• Product: hypothetical protein
• Protein accession: YP_003541135
• Protein GI: 292905264

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTAG AGAACATCAT TCAGGCAGTT GTAAATCGTG ACGGCAATGG CGGCGGCGAA 
TCGCTGATTG TTGCCAATCA TCTTGCTCAG TTGAAATTGT TCGGTGCCAG GGGAATCGAA 
CTTTACCCGG TGCAAGACCC CACTGGAGAG AGAAAGAAAT TTATCTCCAG TATCTGGAAG 
TACAACCGGA TGGATCTTTA TTTGGACTAC ATCTGGGACT TGTACCTGAC TTGTGGCGAG 
ATTCTTTTCT ACCTGCGTCC CACTGGTGAT AGTTATGAAA TCTCATGGTT TCATGGGGGG 
ACAACCGACC CCAACCCAGA GTATAAAGCC TACTACAAGC CAGGGGGTAG GGAACTAGAA 
AGGGTAGTGA TTGCCTATCC CTACAAGCGG CTTTCGCTGC TGGGGACGGA AGAAGAACGC 
TGGGTGAAAC TGGAAATTAC TAAAGAGACA ATCCGCCAGC ATGATTTAAC ACAAAAGCCT 
AATCTCAATG GGATTACGGG TGATATCGAT CTGCAAGACC CTAATGTACA AACTGTAGAG 
AACACCTTGG GGTTTATTCC CTGTGTGGCT ATCCCCAATC ATCCCAGCCG TCCCGGTCAA 
CCAGGGTCAA GTGAGTTTCA TTGGTTGCGT CAGCCGATTG AGCGTCATGA CAAGATGCTG 
ACGACTATCA ATAGAAACTT GTCGCTGTTT GCCAATCCTA CATTGGTGAC GACGCGATCG 
CGCTCTGAGG TTTTGGAAGC TGCTGCTGTA TCAGGTTTTG TTCCCACAGT TGCATCTCAG 
TCTGGGTACT ATCCCAGCAC GAACAGGTCA GACCCCAGGG AGCGCAGTCA GTTTGATGGT 
GGTGAAAAAG TCGCCAGTGT GATTGGTGGT ATTGGGCCTG ATGAACGGGT GGGATATATT 
CAGGTTGACC CGGTGAGTGG TGATCAGAAT TTATATCAAC GGGAATACCG TGAGCAACTA 
CACACAGCTT TGGGTGGTGT TGATCCGTTG GGGATTCGTT CTGGTGCGAC GGCATATGAA 
ATCAAAGTAA GAAGTGGTTC AACTGCGGCG ACTGCTAGGA AAAAATGTTT GGCTTTGTAT 
GACTATGGAC TGTGCAAACT GTTTGAGATG ATTCTCTTGG CTGAGGAGAA TCTGTTTAAA 
CAATCTCTAT TTGCAGTAGC AATTGAGCAA GAAAAAGAAT TTAAAGGCTT ACTGGCTGAC 
ATCTACAAAC AACAGGGAGC CAAGCTCAAG CCCAAAGACA TTCAACTAGA GTCACCCAAC 
GACATCACAG ACGATATCTG TCAGATGCTG TTGGAGTTTG GCGTTATCCC TCGCGGTGTG 
ATTGGGATGC CACCGATGGG GGACAGAGTA ATTGAATGGA GGTTCACCAG TGAAATTTTC 
CCAGACACTT CACGGGAAAT TTTGGATAAG TCGATTGTGG GACGGAACTT GGCAGAGGCG 
GGGATTAATA CTGAGTACGT TTTACGCTTT CTTTTTCCCG ACAAAACCGA TAAAGAAATC 
GCCGCGATGC AGAGTGGGAA TTTTAGCTAT AGAACCACTC AAAACAAAGT TCAAGCGATT 
AATCAACTCA TAGGTTTATA TCAAAACTTT TTGAGTCTCC CTGACCCGCT TGATCCGGCG 
ATGCCCTTGG GGTGGCGATT GGATATCACC CCACTAATCG AAAAAGCTTT GTCGTTAGTT 
GCCCAAGAGT TTTCTTACGG TGAGACTTAC GACGAACCCG ACAAACTCAA TAGCCCTACC 
ACAACTAATG GCAATGGCTC TAACTCATAT AACGATGTAA CAACAAATGG TAGCAGCCCC 
CCAAGCGACA CCAACCCCGG CATTTATACC CCAAGGGACG AGCGCGGCTC CACAGCCGCC 
GCAGGACTCC CAACACAGTT CCCAGGAGTG GGGACAAGTT ACCAACCGCC TGTTGGATAT 
CGTTCAAGGG CGGATTGGGG CAATCCCCTC CCCACCCCCG GCGGTACAGT CACCAATTCC 
GTCCCACGTC TACCAACAGG ACAGCAGCCA AGCAATTTCT ATCCCCCAGG GCTTCCAGCA 
GACATCGCAG TCTCCCCAGA ACTTTGGGGT ATCTTCGCCC AACAGCAACA GACAGGCAAC 
AGCCAACGCT CTAGGGGTAA GCGCTAA 

 

Protein sequence

MTLENIIQAV VNRDGNGGGE SLIVANHLAQ LKLFGARGIE LYPVQDPTGE RKKFISSIWK 
YNRMDLYLDY IWDLYLTCGE ILFYLRPTGD SYEISWFHGG TTDPNPEYKA YYKPGGRELE 
RVVIAYPYKR LSLLGTEEER WVKLEITKET IRQHDLTQKP NLNGITGDID LQDPNVQTVE 
NTLGFIPCVA IPNHPSRPGQ PGSSEFHWLR QPIERHDKML TTINRNLSLF ANPTLVTTRS 
RSEVLEAAAV SGFVPTVASQ SGYYPSTNRS DPRERSQFDG GEKVASVIGG IGPDERVGYI 
QVDPVSGDQN LYQREYREQL HTALGGVDPL GIRSGATAYE IKVRSGSTAA TARKKCLALY 
DYGLCKLFEM ILLAEENLFK QSLFAVAIEQ EKEFKGLLAD IYKQQGAKLK PKDIQLESPN 
DITDDICQML LEFGVIPRGV IGMPPMGDRV IEWRFTSEIF PDTSREILDK SIVGRNLAEA 
GINTEYVLRF LFPDKTDKEI AAMQSGNFSY RTTQNKVQAI NQLIGLYQNF LSLPDPLDPA 
MPLGWRLDIT PLIEKALSLV AQEFSYGETY DEPDKLNSPT TTNGNGSNSY NDVTTNGSSP 
PSDTNPGIYT PRDERGSTAA AGLPTQFPGV GTSYQPPVGY RSRADWGNPL PTPGGTVTNS 
VPRLPTGQQP SNFYPPGLPA DIAVSPELWG IFAQQQQTGN SQRSRGKR