Gene Ava_D0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_D0009 
Symbol 
ID8952396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_014000 
Strand
Start bp5526 
End bp6695 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003541132 
Protein GI292905261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGATAG ATGATGATTT TCCCAGGATT CTGGGAGCAG AACTATTAAG ACCGGATGCC 
CAGTTTATAT CTAAGTTCGT CTGTCAACCT CAAGTTGTTT GGGATGCTTC GGCAACTCGC
GGTAAGACGG TACAGCTCGA TAGATACGAA TACTGGGAAG ACGACAGCTT TACTTTAGAA
TCCCGCCGCC GCGCTCCTAC TCAGACAATT GGTACTGCTA ATTCCCGTGA CATTTTGAAA
TCCAAAATCA TTGTCACCAT TGATGAGTAC ACAGGCCCTA GTGGTGGTGA TGCGAATAAC
CCCAATGCTC CAGGGAATTT CAAGATTCCG ATGGAGACCA TATTGCTGGC TCAACGGGCT
TTGTGGCAGT ACAACCCGCA ACAGATACAA GCCTTTCACC AGAGTATCGG TGCGCTGACT
CTATTCCGGG ACTATCGGAA ATGGTTGGAT AGGGTCTACA TCAATACACT TTTGCAGTCA
CCGTTTACTT ACAACCCCCA AGGTGTAGCG GATGGCGGTA CTTACGCTTC CGGCCCACCA
AAGATTGATG TCAAAAATGA CCTGTTAACC ATCGTGGAAG GGATGCGGAC ACGTAACGTT
CCTACCTTCA GTGATGGGTA TTACTACTGT TTGGCTGCCC CTCGGTTTAT CAAACACCTG
CGGCAAGATC CAGATTTCCG CGCTGTTGCT CAGTATCCTT CTTTCTGTCC TACCAATTAC
CTCCAGCCGG GCATTACACC GTTCTCGGCT CCCATGATGC CACCACCCAA CCAGGGTTAT
ATCTCTGGCC CCAACCAATT GATTTTCGGT GGCTCTCAAT ATGGGCAAGC CAGCTTCATG
GGTGAGGCGA TGCCTACAGG GTTTGTGTTT GAGGGTGTGA GATTTTTTGA ATCCAACAAT
ATGCCCACGG CGACGGTGAA TTTAAATTAC ACCGCGTCTA CTAATGCTGG ACTACATCCC
ACCGGTGCAG CCAACAGAAC TGGACATCTG GGAATTTTCT TAGGTCAGCA GGCGGTGGGA
GAAGCGATCG CAACTGAAGT CCCGGTGAGT GTTCGCTTGA ACAACAATGA CGATTACCAA
AGATTTGTAA TTGCGATTTG GGCTATGTAC GGCGGTTGGT CACTCACCAA TGACCGCTTT
GTGACGGTTG CTAGAACCTA CGGAGATTAA
 
Protein sequence
MWIDDDFPRI LGAELLRPDA QFISKFVCQP QVVWDASATR GKTVQLDRYE YWEDDSFTLE 
SRRRAPTQTI GTANSRDILK SKIIVTIDEY TGPSGGDANN PNAPGNFKIP METILLAQRA
LWQYNPQQIQ AFHQSIGALT LFRDYRKWLD RVYINTLLQS PFTYNPQGVA DGGTYASGPP
KIDVKNDLLT IVEGMRTRNV PTFSDGYYYC LAAPRFIKHL RQDPDFRAVA QYPSFCPTNY
LQPGITPFSA PMMPPPNQGY ISGPNQLIFG GSQYGQASFM GEAMPTGFVF EGVRFFESNN
MPTATVNLNY TASTNAGLHP TGAANRTGHL GIFLGQQAVG EAIATEVPVS VRLNNNDDYQ
RFVIAIWAMY GGWSLTNDRF VTVARTYGD