Gene Ava_D0004 details

Gene Information

• Locus tag: Ava_D0004
• ID: 8952391
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anabaena variabilis ATCC 29413
• Kingdom: Bacteria
• Replicon accession: NC_014000
• Strand: -
• Start bp: 1679
• End bp: 3643
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 38%
• Product: hypothetical protein
• Protein accession: YP_003541127
• Protein GI: 292905256

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAAA GGAAAAATAA TGGTGGTATT CCTAGATTTT TTGACCTACC ACAAAGTAGC 
AAAGTATCTT TTAAGGTTCC CGGTAAAAAA TCAAATCGTC GCAGATTACC CGATGGCAAT 
TATCTTGATG ACGATGCGAT CGCACCACGA CTAGATTTTA TAGAAGATTT TGAACTTACT 
GTTACTGGAG CGCCGAGAGT CTTTAGTCCA GAGCAAGAAT ATAATTATAA ATCTGCGTGG 
AAGAGATACC AAAAAGGTAT GGAGATAGCC CAAGAAGATA AAGTATTGAA AGACGGTGAT 
GATAAATATA AAATACCTTC CCCGAATGCA CCCAAGGGAT ACTGGGAAGT CAGCAAGAAA 
CCTCAAAATA ATATTACTTG TGAATTGCCT TTGCTTTTAA ATCTTCCTAA ATGGTTTGTT 
GGGGATATAA GATTTGATGG AGATTTTGAA ACTATAAACA CTCCAGCAAA TGTAGTAGCT 
CAAAGTTATG ATAATCAGAC AGGATTGTAT ACAGCCACTA TTATTGAAAC TATTAGTATT 
ACAGCCGATA GTGAAGGTAT AGTTAATAAC GATGCTTTGA TAATTATTAA TTCAACAGGT 
GGCGCTTTTA ATGATGGTTC ACCTGTAAAA ATCACCTCAA AGGTTATTAC AACTCATCCC 
GGTGGTGGCA TTAGTATTGG CAATTCTATA TACAAAGGAA CACTTGTACC ACCTTTTGGC 
GGTAGAGTTC CAGACCCGGA AAGTGGATTT GAATTAAAAG AATGGGTGTT TGATACCTTT 
AGCAATGAAG AACAAACAGA GTTAGAATTT ATAAATAATT CCGAATTTAC TACTGGAACA 
AACAGAGAAG ATTACGTAGG CTTTACATTA GAAACTACTG TTGCTGGTGG TTTTGCCTCT 
GAAACATTTC CAGAATGGGA AGTAACTTTT GAAGTAACAG TAGAAATTTA TCTATTTCCT 
GGTGGATTAG AGTTTACATT TGAACCATAC TTTGATGATG AGCTACTTAA TAACTATCGA 
CCAGGAATAG TTTTTAATGA AGAAACTGGA GAAATTGAAT ATTTTCCGAA CGGAGAAAAC 
ACGGCAACAG GTGTAATAGA TGGTGCAAAT GTTAGCTCTA TTTATACTTG GCAATCTAAT 
TTTGATAAAA GCAATATAGT AACTAGTAGT GTAAAAATAG AAAAAACTTG CAATCAAGCA 
ACCAATGTAT CTGGTTTTAC TCTTAGGTCT AGTGGGGCTA TAGATTTTAA TTCTGAACTT 
AATATTAATA AAATAAGTGG CGTTCTTTCT TGGACAATAT CACTAAGCTA TAGCGGTGCA 
GAAATATATC CAAATGACCC TATTGATGCA CTCTTTACTC AACAATATGT AGAATTTTCT 
GGTGAGAATT TTACAGAAGA TGACAAAGAA TCTTATAGCA ATGGAAGTCT TGTTTCATTG 
GAACAAAACA ATTTAACTTA TCAACATGAA TTTAGTGTAA ATTTTAAATA CCTAGAAGGA 
GGGGGGCAGT TTTCAGCATT CTTAACTCAG CAAGTAAGAA TATTTGAAAT TGAATTTGCT 
GATGGTAGTA AATGGGAATG TGGTAATGCT GACGGTGACG GTGACGGTGA CGGTGACGGC 
GACGGTGATA GTGACGGTGA TGGCGACGGT GATTGGCAAT GCAACTGCCC TGACGCAACC 
AAGAAAAAAT CCCCCAACCC CAACAGCACA TCAGATGACG GAATAGAAGA AGACTGGAGT 
AATACCGATG CTGGCGCACA AGATGGGCAG TGTAAGCACA TCTGGGCTGT GAGGATCGTG 
CTGAATGATG TAGCGCCAGA GGAAATTCCT ACAGATATGC CCATTAGTGA AAATTTCCCA 
AATGGTAACG GGAACAGTAC TAACCCCAAA GTCATTGGGG GAAATGGTGG AATAGGATTT 
GATGGATGGA ATCCAGGCAA AAGAAGGAGG GGGAAGAATG CCTAA 

 

Protein sequence

MGKRKNNGGI PRFFDLPQSS KVSFKVPGKK SNRRRLPDGN YLDDDAIAPR LDFIEDFELT 
VTGAPRVFSP EQEYNYKSAW KRYQKGMEIA QEDKVLKDGD DKYKIPSPNA PKGYWEVSKK 
PQNNITCELP LLLNLPKWFV GDIRFDGDFE TINTPANVVA QSYDNQTGLY TATIIETISI 
TADSEGIVNN DALIIINSTG GAFNDGSPVK ITSKVITTHP GGGISIGNSI YKGTLVPPFG 
GRVPDPESGF ELKEWVFDTF SNEEQTELEF INNSEFTTGT NREDYVGFTL ETTVAGGFAS 
ETFPEWEVTF EVTVEIYLFP GGLEFTFEPY FDDELLNNYR PGIVFNEETG EIEYFPNGEN 
TATGVIDGAN VSSIYTWQSN FDKSNIVTSS VKIEKTCNQA TNVSGFTLRS SGAIDFNSEL 
NINKISGVLS WTISLSYSGA EIYPNDPIDA LFTQQYVEFS GENFTEDDKE SYSNGSLVSL 
EQNNLTYQHE FSVNFKYLEG GGQFSAFLTQ QVRIFEIEFA DGSKWECGNA DGDGDGDGDG 
DGDSDGDGDG DWQCNCPDAT KKKSPNPNST SDDGIEEDWS NTDAGAQDGQ CKHIWAVRIV 
LNDVAPEEIP TDMPISENFP NGNGNSTNPK VIGGNGGIGF DGWNPGKRRR GKNA