Gene Snas_6478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6478 
Symbol 
ID8887706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand- 
Start bp6834574 
End bp6835122 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003515186 
Protein GI291303908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.148585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGTA ACCCTCGTTC CCCCAAGCTT CCCGATTTCG TCTCCTGGCC CGCCTTCCCG 
TTTGAGGGCG ACTTCCGTCT CAAACCGGTG GCCGACCCCG CCGACACCGA ACCGCCCCGG 
CGCGGTGAGG AGCCCGGCGA CTGCGCGTCC TGTGCCTCCG GTGACGACGC CTATCTGTGG 
ACCAACGAAC GCTGGCGCGT CAAGTCGCCG CCGAAACCCT CCGGACTCCC GGTGGTCGTG 
ATCCTGGAGA CCCGGGCGCA TCTCGACCTC GGCGACCTGT CGACGATGCA CTCCGCCGAA 
CTGGGCGTGT TGACCGTCCG GTTGGAACGC GCCATCCGTT CGCTGGATTC GGTTGCGCGC 
GTTCACGTCT GCCGCTGGGG CGACGGCTCG GCGCACCTAC AGCTGTGGTT CCTGGCCCGG 
CCCAAGGGGC ACCTGCAACT GCGCGGCCCG TTCATGACGA TGTGGGACGA CATCCTGCCG 
CCCACCGACG AGCAGCAGTG GCGCGAGGAC CTGTCCTACA TCGCCGCGTG GCTCAACGAC 
ACTGACTGA
 
Protein sequence
MAGNPRSPKL PDFVSWPAFP FEGDFRLKPV ADPADTEPPR RGEEPGDCAS CASGDDAYLW 
TNERWRVKSP PKPSGLPVVV ILETRAHLDL GDLSTMHSAE LGVLTVRLER AIRSLDSVAR 
VHVCRWGDGS AHLQLWFLAR PKGHLQLRGP FMTMWDDILP PTDEQQWRED LSYIAAWLND 
TD