Gene Snas_6469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6469 
Symbol 
ID8887695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6822707 
End bp6823528 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003515177 
Protein GI291303899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.138089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTCCC ATCAGCTCAA CGCCATTCCA TCTCTGTTGC GCGGGTTGAT CGATGACGCC 
GCCGTCTTCC CGCCCGGAAA CGCCCCGCTG CCCGAAGCGC TGGCCAGTCA CCGCGAACAC
CGAAACGCCT GGTACGCGGG GCTGGTGGGG CCGCTGTTGC TGCCGTCCAG CAAGCTCGCG
GACGTGCCCG AATCCGACGA ACCACTGCGG GTCGGACTCA TCGCCGACAC CGGAATCGAG
GCCGTCTCAC AGGTGCTGGC ACAGCTGCCG CCCGGCGTCG AGATCACCCA CGTCGAGGCG
CGGGCCGACG ACGACGAGGC GATGGAGGCC CTGGTGGCGG CCTCGACCCG CTGGGGACTG
CGGGTGTTCG CTGAAATACC CATGACGGCG GATGTGTCAC ACGCCCTCAA GACCCTCGGT
CCCACCTCGA TCACACCCAA GTTCCGCACC GGCGGCGAGA CCGCCGACAA GTTCCCGTCG
CCGCAGACCC TGGCCACCGC GATCGTCGGC TGCGCCGAAC AGGGCCTGAG TTTCAAACTC
ACCGCCGGTC TGCACCGGGC GGTGCGGCAC ACCGACCCCG AGACCGGTTT CGTCCACCAC
GGTTTCGCCA ACGTGCTGCT GGCCGCGACC GACGCCGACG GAGGAGCGGG TGTCGCATCG
GTGACAGATA CGCTGTCAAT TACCGAATCC GGGCCACTTC GTGACCGGAT TCGTGGCATG
CTCGCTCACC CGCGCCCGCT GTGGGTGGGA TTCGGATCCT GCAGCATCGT CGAGCCTCTT
GAAGACCTCA GCGGGCTTTC GTTGGTATAC GAGGAGAGTT AA
 
Protein sequence
MCSHQLNAIP SLLRGLIDDA AVFPPGNAPL PEALASHREH RNAWYAGLVG PLLLPSSKLA 
DVPESDEPLR VGLIADTGIE AVSQVLAQLP PGVEITHVEA RADDDEAMEA LVAASTRWGL
RVFAEIPMTA DVSHALKTLG PTSITPKFRT GGETADKFPS PQTLATAIVG CAEQGLSFKL
TAGLHRAVRH TDPETGFVHH GFANVLLAAT DADGGAGVAS VTDTLSITES GPLRDRIRGM
LAHPRPLWVG FGSCSIVEPL EDLSGLSLVY EES