Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6468 |
Symbol | |
ID | 8887694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6821394 |
End bp | 6822578 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | homogentisate 12-dioxygenase |
Protein accession | YP_003515176 |
Protein GI | 291303898 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.213717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATTCCTTACT ACCGCGCCGT AGGGGAGCTT CCTCCCAAGC GGCATACCCA GTTTCGTCAG CCGGACGGCA GCCTGTACGC CGAGGAACTC GTCGGCCAGG AGGGCTTCTC GTCCGATTCC TCGTTGCTGT ACCACCGGCA TCTGCCCACC GCGATCTCGG CTTCCACGCA GCACTTCCCG ACGGCGGCGG CGCCCGAGCC GAACCACCCG CTCAAGCCGC GGCACCTGCG CACCCACAAG CTGGACGGCG GCGGCGACCC GATCCTGGAC CGACAGCACC TGCTGTCCAA TGCGGACTGC CGGATCTCGT ACGCGATGTC GACACAGGCC TCGGTGCTGT ACCGCAACAA CCTCGGCGAC GAGTGTCTGT ACGTCGAGGA CGGCGCCGCG CGGGTGGAGA CGTCGTTCGG CGTCATCGAC ATCGTCAGCG GTGACTACCT GATCATGCCG ATGTCGACGA TCTACCGGAT CGTGCCCACC GGTGATACTC CACTGCGGAC TCTGGTGGTG GAGTCGACCG GTCACATCAC GCCGCCCAAG CGGTACCTGT CGGTGCGGGG CCAGTTCCTG GAGCACTCGC CCTACTGCGA GCGCGACATC CGGGGGCCGT CGGAGCCGCT CGTGGTCGAC GGCGAGAACG TCGACGTCTA CGTGCAGCAC CGGGGCCGGG GCGCGGCCAC CATCTGGACC AAGTTCACCT ACGCCCACCA CCCCTTCGAC GTGGTCGGCT GGGACGGGCA CATGTACCCG TGGGTGTTCT CGATCCACGA CTTCGAGCCG ATCACCGGGC GGATCCACCA GCCGCCGCCG GTGCACCAGA CCTTCCAGGG GCCGAACTTC GTGATCTGCT CCTTCGTACC GCGCAAAGTG GACTACCACC CGGACGCGAT CCCGGTGCCG TACAACCACC ACAACGTCGA CTCCGACGAG GTGCTGTTCT ACACCGGCGG GAACTACGAG GCCCGCAAGG GTTCCGGCAT CGAGCAGGGT TCGATCTCGC TGCACCCCTC GGGGTTCACC CACGGCCCGC AGCCGGGTGC CCCCGAGCGC GCCATCGGTG CCGACTACTT CGACGAGCTG GCCGTCATGG TCGACACCTT CCGGCCGCTC GAACTGTGCG AGGGCGCGCT GGCCTGTGAG GACTCCGGTT ACGCCTGGAC CTGGAACCGC ACGCCCGACG CGTGA
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Protein sequence | MPYYRAVGEL PPKRHTQFRQ PDGSLYAEEL VGQEGFSSDS SLLYHRHLPT AISASTQHFP TAAAPEPNHP LKPRHLRTHK LDGGGDPILD RQHLLSNADC RISYAMSTQA SVLYRNNLGD ECLYVEDGAA RVETSFGVID IVSGDYLIMP MSTIYRIVPT GDTPLRTLVV ESTGHITPPK RYLSVRGQFL EHSPYCERDI RGPSEPLVVD GENVDVYVQH RGRGAATIWT KFTYAHHPFD VVGWDGHMYP WVFSIHDFEP ITGRIHQPPP VHQTFQGPNF VICSFVPRKV DYHPDAIPVP YNHHNVDSDE VLFYTGGNYE ARKGSGIEQG SISLHPSGFT HGPQPGAPER AIGADYFDEL AVMVDTFRPL ELCEGALACE DSGYAWTWNR TPDA
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