Gene Snas_6465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6465 
Symbol 
ID8887691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6818712 
End bp6819599 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003515173 
Protein GI291303895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.55194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAAGC GACGCAAACA ACACCGCGCG ACAGCGGCGA AGCCCGAGAA GACCAAGGTT 
CGCGACGTCT ACGTCCCGCG GCCGTTCGCC GACCTTCCCA ACGAGGGCGA CTGGATCGCG
ATGCGGGAAC TGCTGCCCGC CGCGACCGCC CCGCTGACCG TGAAGCCCGA GTACGCCGAC
AAACTCGGCG ACCGGCAGCT CACGCTCGCC ACCGTGTTGC CGCTGGCCTG GCCCGCCATG
AGCCGCGCCG ACGGACAGGT CTTCGTCGCC ATGCAGCGGC AGTTCCAGTC CGGGGACGTC
AGCCGCGACA TCGCCGCCTC GCTGCTGGCG GCACTGGACG CCGAGCCGGG GCACCCGGTC
GCGGTGCCCG CGCGTCCCGG CGAGGGACCG CGGATGCAGG ACGTCATCGA ACTCAAGAGC
CTCGAAGTGT CCATTCACGA CACATTTGAC TTCTGGCTCG GCGAGGACAC CGACACCGAC
GACCCGCAGG TCAGCGCCAG CATGGAACGG GCCAACGCGT CGATCTACCC GACCAGCCGC
CTAGACGCCG CCAAGAGCGC CTACTGGTGC CAGACCCCCG ACAACACCCA CGTGCGCATC
GTCCTGGAAG AGGACGAGGA CGCCGCGCTG GCGGCACTGG CCCGGCTGCG CGCCGCCGAG
GAACTCAAAC TCGTCCCCGA CTCCAAGTTC GCCGGGATGT TCCGCACCCA CGGTGTGCTG
ATCCCGGTGT GGGACCTGGC CGCCGACACC GTCGCCGACG ACTGCGAGAA GCCGGTCACC
GAGTTCGCGG TCCGCTACGC CGAGGCGCTG GCGAGCACCG AACCGCTGAC CTCCGCCGAA
CGGCGCGCCA AGGACGGCCT CGTCGGACGA CAGCTGAACC TGAGGTAG
 
Protein sequence
MSKRRKQHRA TAAKPEKTKV RDVYVPRPFA DLPNEGDWIA MRELLPAATA PLTVKPEYAD 
KLGDRQLTLA TVLPLAWPAM SRADGQVFVA MQRQFQSGDV SRDIAASLLA ALDAEPGHPV
AVPARPGEGP RMQDVIELKS LEVSIHDTFD FWLGEDTDTD DPQVSASMER ANASIYPTSR
LDAAKSAYWC QTPDNTHVRI VLEEDEDAAL AALARLRAAE ELKLVPDSKF AGMFRTHGVL
IPVWDLAADT VADDCEKPVT EFAVRYAEAL ASTEPLTSAE RRAKDGLVGR QLNLR