| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6457 |
|---|
| Symbol | |
|---|
| ID | 8887683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 6809634 |
|---|
| End bp | 6810392 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003515165 |
|---|
| Protein GI | 291303887 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.805943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAC CCCGCACGGC TCTCGTGACC GGAGCCGGTC GCGGAATCGG GCGCGTGGTG
GCGCAGCGGC TGTCGAGTGC CGGGTACCGG GTGGTCCTGA CCGCCCGCAG CCGGGACCAG
CTGGAGGCCA CCGCGAGCGA ATGCCCGGAG CAGACCCTCG TCGTCCCCGC CGACCTGACC
GCCGACGGCG CGGTCGACGG GCTGTTCGCC GAGGCCGAGT CCGGCTTCGG TCCCGTCGAC
GTGCTGGTCC TCAACGCGGG CGCGGGCTCC TCGGCGCCGC TGCCGCGCGT CACCGACACC
GACTGGCAGC AGCAGCTCGA CCTCAACCTC ACCGCCCCGT TCAGGTGCCT GCGCCGCGCG
GTGCCGACGA TGCGGCAGCG CAGCTGGGGC CGGGTGGTGG CCGTGGCCTC GGTGGCCAGC
AAACGCGGTG AACCGTATAT CGCCGCCTAC ACCGCCGCCA AGCACGGCCT GCTGGGCCTG
GTGCGCTCGG CCGCCGCCGA ACTGGCGGGC ACCGGCGTCA CCGTCAACGC GGTGTGTCCC
GGCTATGTGG ACACTCCGAT GACCGAGGCT TCGGTGGCCA ACATCGCGGC CCGGACCGGC
ACCGACGCGG CCGAGGCCCG GGAACTGCTG GAGCGCAAGC AACCCATCGG GCGGCTGATA
GCTCCCGAAG AGGTGGCCGA TGCCATCATG TTGTGCGTCA ACAGTTCCGG AATCACCGGT
CAGGGAATCA ACGTCGACGG CGGGGCGATC CAGTCATGA
|
|---|
| Protein sequence | MSKPRTALVT GAGRGIGRVV AQRLSSAGYR VVLTARSRDQ LEATASECPE QTLVVPADLT
ADGAVDGLFA EAESGFGPVD VLVLNAGAGS SAPLPRVTDT DWQQQLDLNL TAPFRCLRRA
VPTMRQRSWG RVVAVASVAS KRGEPYIAAY TAAKHGLLGL VRSAAAELAG TGVTVNAVCP
GYVDTPMTEA SVANIAARTG TDAAEARELL ERKQPIGRLI APEEVADAIM LCVNSSGITG
QGINVDGGAI QS
|
|---|
| |