Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6455 |
Symbol | |
ID | 8887681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6807857 |
End bp | 6808639 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator, PaaX family |
Protein accession | YP_003515163 |
Protein GI | 291303885 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCAGTA GTCCGCGTTC GCTGATCGTC ACCGTTTTCG GCCTCTACGC CCGGGAGGCC GGCGGAACCC TGCCGGTGTC CGGGCTGGTG AGGGTGCTCG CGACCCTGTC GGTCGACACC CAGGCGGTCC GGGCCGCGGT GTCGCGCCTC AAACGCCGGG GCATGCTCGA ACCGTCCAAA GTCGATGGCG CCGCCGGTTA CGCGCTGACC GGATCCGGAC GTCGGCTGCT CGCCGAGGGC GACGCGCGCA TCTTCCACCC GCCCCGGGCC GAACTGTCCG ACGGCTGGGT GCTGTGCGTG TTCTCGGTTC CCGAGACCAT GCGCGCCAAG CGGCACGTGC TGCGCGGCAA ACTCACCTGG CTGGGTTTCG GGCAGGCGGC GCCGGGGGTG TGGATCGCGC CCGCGCACAC CATGGACGCC GCCCGGGCGA TGCTGGCCGC GAACGACCTC GCCGGGTACG TCAACCTGTT CCGCAGTGAC TACTGTGGAG ACGCACCGGT CGCCGAGGCC GCCCGGCAGT GGTGGGACCT GCCCCGGCTG GAGGCGATGT ACCGGGAGTT CATCGACGCC CTTCGCGGTG ACCCGGGCGC GGATCAGGCG CTGCCCGCGT GGATCCGGGC GGTGACCGAC TGGCGGAAAC TTCCGTTCCT GGACCCGGGA CTGCCGCGCG AGCTGCTGCC CGCCGACTGG CCCGGGCACG ACGCCGTCAC CCTCTTCGGT GAACTGGAGG CGGATCTGGC CCCCGCCGCG GCCGCACACG CCCGGCGGTT GCTGGGCGTG TGA
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Protein sequence | MASSPRSLIV TVFGLYAREA GGTLPVSGLV RVLATLSVDT QAVRAAVSRL KRRGMLEPSK VDGAAGYALT GSGRRLLAEG DARIFHPPRA ELSDGWVLCV FSVPETMRAK RHVLRGKLTW LGFGQAAPGV WIAPAHTMDA ARAMLAANDL AGYVNLFRSD YCGDAPVAEA ARQWWDLPRL EAMYREFIDA LRGDPGADQA LPAWIRAVTD WRKLPFLDPG LPRELLPADW PGHDAVTLFG ELEADLAPAA AAHARRLLGV
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