Gene Snas_6455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6455 
Symbol 
ID8887681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6807857 
End bp6808639 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, PaaX family 
Protein accessionYP_003515163 
Protein GI291303885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGTA GTCCGCGTTC GCTGATCGTC ACCGTTTTCG GCCTCTACGC CCGGGAGGCC 
GGCGGAACCC TGCCGGTGTC CGGGCTGGTG AGGGTGCTCG CGACCCTGTC GGTCGACACC
CAGGCGGTCC GGGCCGCGGT GTCGCGCCTC AAACGCCGGG GCATGCTCGA ACCGTCCAAA
GTCGATGGCG CCGCCGGTTA CGCGCTGACC GGATCCGGAC GTCGGCTGCT CGCCGAGGGC
GACGCGCGCA TCTTCCACCC GCCCCGGGCC GAACTGTCCG ACGGCTGGGT GCTGTGCGTG
TTCTCGGTTC CCGAGACCAT GCGCGCCAAG CGGCACGTGC TGCGCGGCAA ACTCACCTGG
CTGGGTTTCG GGCAGGCGGC GCCGGGGGTG TGGATCGCGC CCGCGCACAC CATGGACGCC
GCCCGGGCGA TGCTGGCCGC GAACGACCTC GCCGGGTACG TCAACCTGTT CCGCAGTGAC
TACTGTGGAG ACGCACCGGT CGCCGAGGCC GCCCGGCAGT GGTGGGACCT GCCCCGGCTG
GAGGCGATGT ACCGGGAGTT CATCGACGCC CTTCGCGGTG ACCCGGGCGC GGATCAGGCG
CTGCCCGCGT GGATCCGGGC GGTGACCGAC TGGCGGAAAC TTCCGTTCCT GGACCCGGGA
CTGCCGCGCG AGCTGCTGCC CGCCGACTGG CCCGGGCACG ACGCCGTCAC CCTCTTCGGT
GAACTGGAGG CGGATCTGGC CCCCGCCGCG GCCGCACACG CCCGGCGGTT GCTGGGCGTG
TGA
 
Protein sequence
MASSPRSLIV TVFGLYAREA GGTLPVSGLV RVLATLSVDT QAVRAAVSRL KRRGMLEPSK 
VDGAAGYALT GSGRRLLAEG DARIFHPPRA ELSDGWVLCV FSVPETMRAK RHVLRGKLTW
LGFGQAAPGV WIAPAHTMDA ARAMLAANDL AGYVNLFRSD YCGDAPVAEA ARQWWDLPRL
EAMYREFIDA LRGDPGADQA LPAWIRAVTD WRKLPFLDPG LPRELLPADW PGHDAVTLFG
ELEADLAPAA AAHARRLLGV