Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6433 |
Symbol | |
ID | 8887659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6784361 |
End bp | 6784999 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | RNA polymerase sigma-24 subunit, ECF subfamily |
Protein accession | YP_003515142 |
Protein GI | 291303864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.522555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACC TTTCCGGCTG CGACGACAAG GAACTGTTGC GCCGTCACGC CACCGGAGGC GACCGGGACG CGTTCGGCGA ACTGTTCCGG CGGCACCGGG ATCGGCTGTG GGCGGTGGCG CTGCGGACGC TGTCGGACCC CGAGGAGGCC GCCGACGCGT TGCAGGACGC CATGGTCAAC GCCTACCGGG CCGCGGCCCG GTTCCGGGGC GACTCGGCGG TCACGACCTG GCTGCACCGC ATCGTCGTCA ACGCCTGCCT GGACCGGGTG CGGCGCAAGC AGGCCCGTCC GGCGGTGCCG ATGTCGGACC AGCTGCCGGA ACCGGCGATG CCCGGCGCCG ACCCCGCCGA CGCGGCCGGG GTGCTGGCGG TGCGGCAGGC ACTGGCGGAA CTGCCCTTCG ACCAGCGGGC CGTCGTGGTC TACATCGACA TGCTCGGCTA CCCGGTGGCC GACGTGGCCG CGATCCTCGA GATCCCGGCC GGAACCGTGA AGAGCCGGGC GTCGAGAGCG CGCTCACAGT TGGCGACTTT GTTGAGCGAG ATAGGGAACC GGGCCCCGGC CGGCGACGTC GGACCAATAG CGGGACCCGA CGCCGGTGAT CCGGCCACCA CCACCTCGGG GAAGGAGGAG AAGCAGTGA
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Protein sequence | MADLSGCDDK ELLRRHATGG DRDAFGELFR RHRDRLWAVA LRTLSDPEEA ADALQDAMVN AYRAAARFRG DSAVTTWLHR IVVNACLDRV RRKQARPAVP MSDQLPEPAM PGADPADAAG VLAVRQALAE LPFDQRAVVV YIDMLGYPVA DVAAILEIPA GTVKSRASRA RSQLATLLSE IGNRAPAGDV GPIAGPDAGD PATTTSGKEE KQ
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