Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6427 |
Symbol | |
ID | 8887653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6779869 |
End bp | 6781113 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_003515136 |
Protein GI | 291303858 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.93178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGA AGACGACGCA GGACGACTAC TCCGACCGCT ACGCGGCACG CGTACACGGC ATGGCCCAGT CCGAGATCCG GGCACTGTTC TCCGTCGCCA GTCGTCCCGA GGTGGTGTCG CTGGCGGGCG GCAACCCCTT CACCGCCGCC CTCGACATGG ACGAGCTCGG CGAGATGTTC GCCCGGCTGC TGGCCGAGGA CGGCGCGAAG TCGCTGCTGT ACTGCCCCGG ACAGGGCGAT GTCGCGCTGC GGGAACAGAT CTGCGAGGTC ATGGCGCTGA CCGGCATCGA CGTCACCGCC GGGGCCTCCC CCGACGACGT CGTGGTCACC GTCGGCGCCC AGCAGGGACT CGACCTGCTG TGCCGGGTGT TCCTCGACCC CGGCGACGTG GTGCTGGCCG AGGGCCCCAC CTACGTGGGG GCGCTGGGCG TGTTCCAGGC CGCGCAGGCC CGGGTGCGGC ACGTGGCCAT GGACGACGAG GGCCTGATCC CCGCAGCGCT GGAGACCGCG ATCGCCGAGG CGCCGACGCG GCCGAAGTTC CTGTACACCG TCCCGACGTA CCAGAACCCC ACCGGCGTGA CGCTGTCGGA ATCGCGGCGG CAGGAGGTGC TGGAGATCTG CGACCGGCAC GGCCTGCTCA TCGTCGAGGA CGATCCCTAC GGGATGCTCA GCTTCGACGG CAACACCGCC ACCCCGTTGC GCGCCAGGCG AAGCGAGAAC GTCTTCTACG TCGGCACCTT CTCCAAGATC TTCGCCGCCG GGCTGCGGGT CGGCTGGGTG CTGGCCCCGC CGGCGGTGCG CGACAAGCTC GTGATGGCCT CCGAGGCGGC GGTGCTGTGC CCGTCCACGT TCACGCAGGC CGCCGCGACC CGCTACCTGA CCACGATGCC GTGGCAGCAG CAGGTCAAGA CCTTCTCGAC CCTCTACTGT GAACGCCGGG ACACCATGCT GGCGGCCATG TCCGACCACT TCCCGGCCGC CATGACCTGG ACCCACCCCG GCGGCGGACT GTTCGTGTGG GCGAACCTGC CCGAGGGCCT GGACTCCAAG GCGATGCTGC CGCAGGCGCT GGCGGCCCGG GTCGCCTACG TCCCGGGCAC CGGCTTCTAC GCCGACGGCT CCGGCGCCGG GCAGATGCGG CTCAACTTCT CGTTCCCGCC CGGCGACGAG ATCCGGGAGG GCATTCGCAG GCTCTCCGGG GTCATCAATT CCGCGGCCCG ACTGCGCGAT ACCTTCACGA CATGA
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Protein sequence | MSTKTTQDDY SDRYAARVHG MAQSEIRALF SVASRPEVVS LAGGNPFTAA LDMDELGEMF ARLLAEDGAK SLLYCPGQGD VALREQICEV MALTGIDVTA GASPDDVVVT VGAQQGLDLL CRVFLDPGDV VLAEGPTYVG ALGVFQAAQA RVRHVAMDDE GLIPAALETA IAEAPTRPKF LYTVPTYQNP TGVTLSESRR QEVLEICDRH GLLIVEDDPY GMLSFDGNTA TPLRARRSEN VFYVGTFSKI FAAGLRVGWV LAPPAVRDKL VMASEAAVLC PSTFTQAAAT RYLTTMPWQQ QVKTFSTLYC ERRDTMLAAM SDHFPAAMTW THPGGGLFVW ANLPEGLDSK AMLPQALAAR VAYVPGTGFY ADGSGAGQMR LNFSFPPGDE IREGIRRLSG VINSAARLRD TFTT
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