| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6416 |
|---|
| Symbol | |
|---|
| ID | 8887642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6771321 |
|---|
| End bp | 6772475 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_003515125 |
|---|
| Protein GI | 291303847 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTC GACTGAGCAC AGAGGAGACC GCCCTTCGGG AGGCGGTGGA GGAGTTCGCG
CGCGAGAAGG TCGCACCGGT GGCGGGCGAC CTGTACGAGC GCGGTGAGTT CCCGTACAAG
CTGGTCGCGC AGCTGGGCGA GATGGGCATC TTCGGGGCCT GCTTCGACGA CAAGTACGGC
GGCGCGGGCG GCGACTACTT CATGTTGTGC CTGGCGCTGG AGGAACTGGG CCGGGTCGAC
TCCTCGCTGG CGATCACCGT CGAGGCGGCG GTGTCGCTGG GCGCGATGCC GATCTACCGC
TTCGGCACCG ACGAGCAGAA GCAACGCTGG CTGCCGAAGC TGTGCCGGGG TGAGGCGCTG
GCGGCCTTCG GTCTGACCGA GCCCGACGGC GGCTCCGACG CGGGCGCCAC CAAGACCCGG
GCGGTCCTGG ACGGCGACGA GTGGGTCATC AACGGCGGCA AGTGCTTCAT CACCAACGCG
GGCACCGACA TCACCGAGTT CGTCACGGTC ACGGCCGTCA CCGGCACCAA GCCCGACGGC
CACAAGGAGA TCTCGACGAT CATCGTGCCG CGCGACACCC CGGGCTTCAC CGTGGGACCC
AAGTACTCCA AGGTCGGCTG GAGTTCCTCC GACACCCGGG AACTGTTCTT CGACGACTGC
CGGGTACCGG CGGCGAACCT GCTGGGCGAA CGCGGCCGCG GCTACGCGCA GTTCCTGCGG
ATCCTGGACG AGGGCCGCAT CGCTATCGCG GCGCTGGCCA CCGGTCTGGC GCAGGGCTGT
GTCGACGAGT CGATCCGCTA CGCCAAGGAG CGGCACGCCT TCGGGCACCC GATCGGTGAC
TTCCAGGCGA TCCAGTTCGC GATCGCCGAC ATGGAGCTGC GGGCCCACAC GGCCCGGCTG
GGCTACTACG ACGCGGCGGC CCGGATGCGC GCCGACGCGC CGTTCAAGCG CCAGGCCTCG
ATCGCCAAGC TGCACGCCTC CAACGCCGCG GTCGACAACT CGCGGGCCGC GACCCAGATC
TTCGGCGGCT ACGGGTTCAT GAACGAGACC CCGGTGGCCC GGATGTGGCG CGACTCCAAG
ATCCTCGAGA TCGGCGAGGG CACCTCGGAG ATCCAGCGGA TGCTGATCGC CCGCGACCTG
GGAGTGCCGT CGTAA
|
|---|
| Protein sequence | MDFRLSTEET ALREAVEEFA REKVAPVAGD LYERGEFPYK LVAQLGEMGI FGACFDDKYG
GAGGDYFMLC LALEELGRVD SSLAITVEAA VSLGAMPIYR FGTDEQKQRW LPKLCRGEAL
AAFGLTEPDG GSDAGATKTR AVLDGDEWVI NGGKCFITNA GTDITEFVTV TAVTGTKPDG
HKEISTIIVP RDTPGFTVGP KYSKVGWSSS DTRELFFDDC RVPAANLLGE RGRGYAQFLR
ILDEGRIAIA ALATGLAQGC VDESIRYAKE RHAFGHPIGD FQAIQFAIAD MELRAHTARL
GYYDAAARMR ADAPFKRQAS IAKLHASNAA VDNSRAATQI FGGYGFMNET PVARMWRDSK
ILEIGEGTSE IQRMLIARDL GVPS
|
|---|
| |