Gene Snas_6397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6397 
Symbol 
ID8887623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6749337 
End bp6750629 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content66% 
IMG OID 
ProductChitinase 
Protein accessionYP_003515106 
Protein GI291303828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCC CGTTCCCCGT GCTGGCGGCA CTCGCCGCCG CCACGGCACT GCTACTGCCC 
ACCGGGGCCG CCGTCGCGGC CGAGCCCGAC GCCGACGATC CGAAGTCCGG AGGTCGCAGC
GTCGGCTACT TCACCCAATG GGGCGTCTAC GACCGTGGAT TCCTCGTCAA GGACATCGTC
GACTCAGGAC AGGTCAACAA CCTGACCCAC ATCAACTACG CCTTCGGCAA CGTCAACGAA
CAGGGCCGCT GCTTCGAGGC CAACCAGGCC GGGGTCGGTG ACGCGTGGGC CGACTACCAG
CGTCGCTACA CCGCGGCCGA GTCCGTCGAC GGCGTGGCCG ACACCTACGA CCAGCCGCTG
GCCGGGAACT TCAACCAGCT CAAGGAACTC AAGGCCGCGC ACCCGGACCT GAAGATCCTG
TTCTCGCTGG GCGGCTGGAC CTGGTCGAAG TACTTCTCCA ACGCGGCGCT CCCGGAGAAC
CGGGAGGCGT TCGTGTCCAG CTGCATCGAC ATGTTCATCA AGGGCAACCT GCCCAAGATC
GGCGGCGAAC CCCAGGGCGG CGACGGGGTC GCGGCGGGGA TCTTCGACGG CTTCGACCTC
GACTGGGAGT GGCCCGGCAG TCCCGGCAAC GACGGCAACG TGATCCGGCC GGAGGACAAA
CAGAACTACA CCGCGCTGGT CGCCGAGTTC CGCGAGCAGC TGGACGCGCT GGGCGACGGC
TACGAACTGT CGGCCTTCGT GCCCGCCGAC CCCGAGAAGG TGGAGGCCGG ATTCGAAGTC
CCGCAACTGA TGGAGAACTT CGACTTCGTC AACGTCCAGG GTTACGACCT GGCCGGGGCC
TGGGACCCGA CCACCAACCA CCAGGCCCAG ATCCACTCGC CCGCCGACAA CCCGAACCCC
GCCAAGTGGA GCTCCGACCT GGCGATCCAG ACCTGGAAGA ACGCCGGAGC CCCGGCGGAC
AAACTGGTGC TGGGCCTGCC CGCCTTCGGG CGCGGCTGGA CCGGCGTCGG CTCGGCGAAC
AACGGCCTGT ACCAGACGAG CACGGGCCCG GCACCCGGGA AGTACGAGCC GGGCATCGAC
GACTACAAGC TCGTCAAGGA CAAACCCGGC CAGGTGTTCC GCGACGAGGA GAACATGGCG
GTGTGGAAGT ACGACGGCAC CCAGTTCTGG TCTTATGACG ATCCGGCGAT GATCGCCAAG
AAGATGTCCT ATATAGCCGA ACAGGGCCTT GGCGGAGCGA TGATCTGGTC GCTCGACGGG
GATGACGGCA CCCTGGTGGC CGAGATGGGT TAG
 
Protein sequence
MKRPFPVLAA LAAATALLLP TGAAVAAEPD ADDPKSGGRS VGYFTQWGVY DRGFLVKDIV 
DSGQVNNLTH INYAFGNVNE QGRCFEANQA GVGDAWADYQ RRYTAAESVD GVADTYDQPL
AGNFNQLKEL KAAHPDLKIL FSLGGWTWSK YFSNAALPEN REAFVSSCID MFIKGNLPKI
GGEPQGGDGV AAGIFDGFDL DWEWPGSPGN DGNVIRPEDK QNYTALVAEF REQLDALGDG
YELSAFVPAD PEKVEAGFEV PQLMENFDFV NVQGYDLAGA WDPTTNHQAQ IHSPADNPNP
AKWSSDLAIQ TWKNAGAPAD KLVLGLPAFG RGWTGVGSAN NGLYQTSTGP APGKYEPGID
DYKLVKDKPG QVFRDEENMA VWKYDGTQFW SYDDPAMIAK KMSYIAEQGL GGAMIWSLDG
DDGTLVAEMG