Gene Snas_6375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6375 
Symbol 
ID8887601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6726023 
End bp6726766 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content65% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003515084 
Protein GI291303806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCC ATTCGATGGT GATGTTGCGC CGCAACTTCA AACACATCGC CCGCAACCCG 
GTCTCGGTGT TCAACTCGAT CCTGATGCCG ATCTTCATGC TGCTGATGTT CGTGTACATG
TTCGGCGAGG CGTTCAGCGT CGGCGTCGAC TATGTGGACT ACGCGACGCC GGGGCTGATG
CTGATGGCCG TCTGTTATGG ACTGGGAGCC ACCGCGACCG CGGTGAACTC CGACATGACC
AAGGGCATCA TCAACCGGTT CAAGGTCATG GACGTCTCCC GGGGCGCGGT GCTCAACGGC
CACGTCATCA CCAGTGTGCT GACCAACGTG ATCGCGATCG CGGCCCTGGT CGGGGTGGCG
TTCGCGATGG GGTTCAGCCC GGCGGCGGAC CTGCTGGACT GGCTGGCCCT GGCCGGAATC
GTGATCCTGC TCGGCTTCGC GGCCGGTTGG CTGACGATCG CCCTGGGGAT CGCGGCGAAG
TCCCCCGAGA CGGCGGGCAT GGCCGCCGTA CCGATGGTGC TGCTGCCGTT CTTCTCCAGC
GCGATCGTCC CGGCCGACAT GATGGGCCCG GGCCTGCGGG AGTTCGCGAA GTACCAGCCC
TTCACGCCGA TCATCGAGAC GATGCGGGGC CTGCTGGCCG GTAAGCCGGA GACCGGTGAC
ACGCTCACCG CCGTCGCCTG GTGCCTCGGG ATCGCCCTCG TCGGCTACCT GTGGGCCCGG
TCCACGTTCA AGAAGCGAGC GTGA
 
Protein sequence
MKSHSMVMLR RNFKHIARNP VSVFNSILMP IFMLLMFVYM FGEAFSVGVD YVDYATPGLM 
LMAVCYGLGA TATAVNSDMT KGIINRFKVM DVSRGAVLNG HVITSVLTNV IAIAALVGVA
FAMGFSPAAD LLDWLALAGI VILLGFAAGW LTIALGIAAK SPETAGMAAV PMVLLPFFSS
AIVPADMMGP GLREFAKYQP FTPIIETMRG LLAGKPETGD TLTAVAWCLG IALVGYLWAR
STFKKRA