Gene Snas_6356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6356 
Symbol 
ID8887580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6703569 
End bp6705047 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content71% 
IMG OID 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003515065 
Protein GI291303787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG AGTCGCAGGC CGCGCTGGCC ACACCCGCCG GACGCGGCAT CGTGCTGGCA 
GCCGTGCTCG GGTCCAGTGT GGCGTTGCTG GACGGAACCG TCGTCAACGT CGCGCTGCCG
CACATCGGCG GTGATCTCGG ATCCGGAATG GATGGTTTGC AGTGGATCGT CAACGGCTAC
ACGCTGATGC TGGCCGCGCT GGTGCTCACC GGTGGGGCGC TGGGTGACCG GTTCGGGCGA
CGAAGGCTGT TCCTCGTCGG CGTGATCTGG TTCGGCGTCG CCTCGGCGCT GTGCGGATTC
GCGCCCAACA TCGGCACCCT GATCGTCGCG CGCATCGCCC AGGGCATCGG CGCCGGGCTG
CTGACGCCGG GCTCGCTGGC CATCATCCAG GCGTCGATCC GCAAATCCGA CCGGGCCAAG
GCGATCGGCG CCTGGTCCGG GCTGGGCGGC GTCGCGGCGG CGGCCGGGCC GTTCCTGGGC
GGCTGGCTGG TGGACGCGTT CTCGTGGCCC TGGATCTTCT TCCTCAACAT CCCGCTGGTG
ATCGTCTCGG TGCTGGCGAC CCTGAAATGG GTGCCCGAGA CCCGTGACGA GACCGCGACC
GGGCGCTTCG ACATCACCGG CAACGTCCTG GGGGCGCTGT TCCTCGGCGG GGTCACCTTC
GCGCTGGTGC AGTCGGGCGA TCCGGGCCCG GCGATTGTCG CCGGTGTCGT CGGCGTGGCC
TGCGGCATCG CGTTCGTCAT CGTCGAACGC CGCAGCGCCT CACCGGTGCT GCCGCCGACC
ATGTTCGCCA GCCGCCAGTT CACCGCCATC AACGCCGTCA CCTTCTGCGT GTACGCCGGA
CTGGGCGGGG TGCTGTTCTT CCTGGTGATG CAGTTGCAGG TGGTCTCCGG CTACTCGGCG
CTGGAGGCCG GGATCACGAT GCTGCCGTTC ACGATGCTGA TGCTGGTGTT CTCGGCCCGG
GCCGGGGCGC TGGGCGAACG GCTCGGGCCC CGGCTGCCAC TGGCGGTCGG TTCGGCGCTG
TCGGCGATCG GGATCCTGCT GCTGCTCGGC GTCGGTCCCG ACGCGCCGTA CCTGACCCGG
GTGCTGCCGG GCGTGCTGGT GCTGAGCGTC GGCATGACCA TCACGGTGGC GCCGTTGACG
GCGGGAGTGC TGGCCGCCGC CGACGCCGCC CACGCCGGGG TCGCCAGCGG CATCAACAAC
GCCGTGGCCC GGGCCGCGAG CCTGCTGGCG GTGGCCGCGC TGCCGATGGC CGCCGGGATC
ACCGGCGACT CCTATGAGGA CCCCACCGCT TTCGCGCCCG GGTACCGGAT CGCCGTGGTC
ATCTGCGCCG GGCTGGTCCT CGTCGGGGCG GTCATAGCGG CGCTGCTCGT CAGCGGCCGC
GAGCCCGAAC CGGAGGCTCC GCGTCCGGTG TGCCGCACCC AGTGTCCTTA CGCCGCACCG
CAACTGGAGC CGGACGCCGA AGCGGCTACT CCTTCTTGA
 
Protein sequence
MAEESQAALA TPAGRGIVLA AVLGSSVALL DGTVVNVALP HIGGDLGSGM DGLQWIVNGY 
TLMLAALVLT GGALGDRFGR RRLFLVGVIW FGVASALCGF APNIGTLIVA RIAQGIGAGL
LTPGSLAIIQ ASIRKSDRAK AIGAWSGLGG VAAAAGPFLG GWLVDAFSWP WIFFLNIPLV
IVSVLATLKW VPETRDETAT GRFDITGNVL GALFLGGVTF ALVQSGDPGP AIVAGVVGVA
CGIAFVIVER RSASPVLPPT MFASRQFTAI NAVTFCVYAG LGGVLFFLVM QLQVVSGYSA
LEAGITMLPF TMLMLVFSAR AGALGERLGP RLPLAVGSAL SAIGILLLLG VGPDAPYLTR
VLPGVLVLSV GMTITVAPLT AGVLAAADAA HAGVASGINN AVARAASLLA VAALPMAAGI
TGDSYEDPTA FAPGYRIAVV ICAGLVLVGA VIAALLVSGR EPEPEAPRPV CRTQCPYAAP
QLEPDAEAAT PS