Gene Snas_6352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6352 
Symbol 
ID8887576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6699510 
End bp6700769 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content68% 
IMG OID 
Productnatural resistance-associated macrophage protein 
Protein accessionYP_003515061 
Protein GI291303783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA GGAAAATCGC GGACGCCTCG CCCGCAACCC CCACCAAAAG ACAACGCTTC 
GGCCCCGGGC TGCTGGTCAC CGCCGCCTTC ATCGGGCCCG GGACGGTGAC AACGGCCAGC
GTGGCCGGTG CCGAATTCGG CTTCGCCCTC GTGTGGGCCG CCGTCTTCGC GATCCTTGCC
ACGATGGTCA TGCAGGAGAT GGCGGCCCGG CTCGGCATCG TCAGCCGCGC CGGACTCGGT
GAGGCGCTGC GCGCCACCTT CACCAACCCG GTCACCGGGG TCATTGTCGC GGTGCTGGTC
GTGGCCGCCA TCGCGGTCGG CAACGCCGCC TTCCAGACCG GCAACATCGC CGGGGCCGCC
GTCGCCCTGA CCACGATCAG CGGCGTGCCC ACCCAGGTGT GGGCCGTCGC CGTGGGCGTG
CTGGCCTTCG GGTTGCTGTA CACCGGCATC TACCGGTTCA TCGAAGCCGT GATGATCGCG
CTGGTCGGGG TGATGACCAT TGTGTTCATC GTGACCGCCG TCGTCGTGCG CCCCGACCTT
GGTGCGCTGG CCGCCGGACT CGTACCGACC ATTCCGGACG GTTCGACGAT CACCGTCATC
GCCCTCATCG GAACCACCGT GGTTCCCTAC AACCTGTTCC TGCACGCCAG TTCGGTGCGG
CAGAAGTGGA CCGCCGACAT TCCACTGGAG AAGTCGCTGC CGCAGGCCCG CACCGACACC
TACGTGTCGG TCGGCGTCGG CGGCGTCATC ACGCTGGCCG TCGTCACCAC GGCCGCCGCC
TCGCTGTTCG CCCACGGGCT GAGCGTCTCC AACGGCGCCG ACATGGCCCA GCAGCTGGAG
CCGCTGCTGG GCCCGGCCGC CAAGTGGTTC TTCGCCGTCG GACTGTTCGC CGCCGGACTC
ACCAGTGCCA TAACCGCGCC ACTCGCGGCG GCTTTCGCTG TCAGCGGCAT GCTCGGGTGG
AGAATGGATC TCAAGTCCTG GAGGTTCCGG GGCGTGTGGG TGGCTGTCCT GGTGATCGGC
GCCGTGCTGG CGGTGGCGGT CGGCGAGAGC CCGGTTCCGG CGATCATCTT CGCGCAGACG
ACCAACGGCC TGCTGCTGCC GATCATCGCG GTGTTCCTGC TGGTGGTCGT CAACCGGAAG
CAGGTCATGG GTGAACACCG AAACAGCCTG GCCCGCAACC TGGCCGGCGG TACGGTCGTC
CTGGTGGCGA CCGGGCTCGG TGTCTTCAAC ATCCTCAAGG GACTGGGCGT CCTGGCCTGA
 
Protein sequence
MSDRKIADAS PATPTKRQRF GPGLLVTAAF IGPGTVTTAS VAGAEFGFAL VWAAVFAILA 
TMVMQEMAAR LGIVSRAGLG EALRATFTNP VTGVIVAVLV VAAIAVGNAA FQTGNIAGAA
VALTTISGVP TQVWAVAVGV LAFGLLYTGI YRFIEAVMIA LVGVMTIVFI VTAVVVRPDL
GALAAGLVPT IPDGSTITVI ALIGTTVVPY NLFLHASSVR QKWTADIPLE KSLPQARTDT
YVSVGVGGVI TLAVVTTAAA SLFAHGLSVS NGADMAQQLE PLLGPAAKWF FAVGLFAAGL
TSAITAPLAA AFAVSGMLGW RMDLKSWRFR GVWVAVLVIG AVLAVAVGES PVPAIIFAQT
TNGLLLPIIA VFLLVVVNRK QVMGEHRNSL ARNLAGGTVV LVATGLGVFN ILKGLGVLA