| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6346 |
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| Symbol | |
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| ID | 8887570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 6692591 |
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| End bp | 6695695 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003515056 |
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| Protein GI | 291303778 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTTTC GAGTCCTTGG CCCGGTTGAG GTGCGCCGCG ACGGCGTGGC CGTGCCGATC
GGCGGCGGCC GTCAGAAGGC CGTTCTGGCC GCGCTGGTCT GCCACGCCGA GGACTGGATG
TCGCGCTCGC GGCTGCTGAC GACGGTCTGG GACGAGGCGC CGGATTCCGC CGCCGCCAAC
CTGCGTACCT ACCTCGCCAA GCTCCGTCGG GCGCTGGCCG ACGACGCTGG TTCGCGGCTG
GAACTCGGCG AGGGCCGGGT GCGGCTGCGC ATCGGCGGCG GGGAGAGCGA TCTGCGGCGG
TTCCGCGACC TGAACGGACG GGGCGAAGCG GCGTTCGCCG CCGGGGACCA TGCCGAAGCG
GCGCGGGCGT TCGCCGAGGC GCTCGCGCAG TGGCGGGGCG AACCCTTCGA GACGGCCACC
GTCGACCGTC CGCTCGCGGC GTTGGCGATG GAGCTGTGCG AGGCGCGCGC CGAGACGCGT
CGCAGGTATC TGCGGGTTCT GGTCGAGCTG GGGCGGTATG ACGAGGCGAT CGCGGGGCTG
CGGACGGAGG TGACCGCCGA TCCGCTCGCC GAGCAGCCGA TCGAGCTGCT GATGCTGGCG
TCGTATCGCG GGGGACGGCC GGACGAGGCG CTGGCGTTGT ACCGCGATAC CCGGGTGCGG
TTGGTCGACG AGCTGGGCGT GGACCCTTCG CCGCGACTGG CGGCGCTGTA CGAGCGGATG
GTGTCCGGTG ACGAGCCTCG GGTGTCGCGG GACGGCGAAG CGGCGCGGGA GCGAGGCACC
GGACTGCCGC GGCTGGTTCC GGCTCAGCTG CCCGCCGACG TTCCCGGGTT CACCGGGCGC
GACAGCGAGG TTGAGGCACT GTGCTCGGCG GTGACCCAGC GACGCTCGGG AGCGCTGGTG
GTCTCGTCCG TGGAAGGCAT GGCGGGCATC GGGAAGACCG CGTTGGCGGT GCACGCGGCC
CGGCGGTTGG CGGACGAGTT CCCGGACGGG CAGTTGTTCA TCGACCTGCA TGGCTTCGAC
GCTGACGCGC CCGCGACCGA CCCGGCGGTG GCACTGGAGC GGCTGTTGCA CAGCTTGGGC
GTCGATCCCC GGCAGATCCC GGAGAACCTG GACGAGCGGG CGGGGCTGTA TCGATCGATC
CTGAGCGATC GCAGTGTGCT GATCGTGCTG GACAACGCCA GTGGGGAGCA GCAGGTGGGG
CCGCTGTTGC CCGGCGGCGA TGCGAGCCTG GCGATCGTCA CCAGCCGTCG CAGCCTGGCC
GGTCTGGACC AGGCCCGGTC GATCCAGCTG GAGCTGTTGG GCCGCGCGGA GGCGATAGCG
CTGCTGGCCG CCGCGCTGGG GCCCAGTCGG GGCGGTGCGG GGCAAAAATC CGTCCCCGCC
GTGGAGCCCG GCCGGTTCGC TGCGGCAGAC GAAGCCGTAG CCGCCGAGAT CGTGGCTGTC
TGCGGCATGC TGCCGCTGGC GATCCGGATC GCCGCCGCGC GGCTGCGACA CCGCCCCGAC
TGGACGCTTG CCGATCTGCG CGACCGGCTC CAGCAAGCCG GACTGGCCGG GCTGTGCGCC
GGCGACCGCA GCGTCACGGC CGCGTTCGAG ATGTCCTACG CCGAGCTCGA TGACTTGGCT
CGCAACGCTT TCCGGCGCCT GGGCTTGCAT CCCGGCCACG ACTTCGACGT GTACACCGCC
GCCGCGTTGT GCGCGGAACC GGCTGACGAC CCAAGCGAGG CTTCGCCGTC ACGCCACCCC
TCGCTGTCGT CCACACAGGC CACACTCGAC GAACTCGTCG ACGTCAACCT CCTCATCGAG
TTCCGCCCCG GCCGCTACCG CTTCCACGAC CTCGTACGCG AGTTCGCCGC CCACAAAGCC
ACCCTGGACA CCCCCGAAAC CCGAGCCCAC GCTCGCCAAC GCCTCGGCGA CCTCTACCTC
TACTACGCGG GCAAGCTCTA TGCCGCCGAA CCGATCGTGT CCATCGGCCG CGACTACCGA
GTCCGTGCCC CCGAAACCCC AACGCCAACC ATCCCCGACG CCACCACGGC ACTGGCCATC
ATGGACGATG AGAACCCCAA CATCCTGGCC TTCATCGAAT CGGGGCACGA CCACGACGTC
GGCGCCCAAT CCGTCGAACT GGCCACCCTG CAACTGAGCT ACCTATGGCG CCAAGCCCGC
TACAACGACT TCCCGGCCCG CTTCCCGAAA CTGCTCGACA CCGCCAAACG CCTCGGCGAC
CCCGCCGCCG AAGCCTGGCT GCGCATCGCC CAGGGTTCCT GCCTGGCGAA ATGTGGACAG
TCCGAACAGG CCATCGACGA GCTCACCCTC GCCCGCCGCA TCGGCGAGCG CGTCGGCCAG
CCCGACATAA CGCTCACCGC GACCTTCGAG ACCGCCATGG CCCAGATCGG TGCGGGCCGG
TTCGCCGACG CCAGCATGAC CCTGGCCGAA GCCCTGGCGT CGCGGCCGGG CGGCGACGAC
TTCGTCGAGA TGGAGATCCG CAATCGCCTG GCGCAGTGCG CTTTCCGCCT CGGCGACGCC
GCCGGCGCGC TGCGCGACCT GGACCGGGCG ATCGAGCTGG CCAACCGACG CGGCGACCAG
CAGGCCCGGG CCCGTTTCAC GTACAACAGC GCCGAGCTGC AACTCCACGC CGGAAACCCC
GCCGACACCC TGGAGCGTTT GAGCACCGCC CGCGACTACT ACGGCCCCGA CATCGAGCCC
GACAACCTGT CGATGTTGTT GAGCACCAAG GCCAAGACGC TGCTCGCGCT GGGGCGCCCC
CAAGACGCCC TCGACGCCCA CCGTGAGGCC GTCGCCGTCG CCACCGGGTT CGGTGACGTC
TGGCTGTTGG CGACGGCGGT GGTGGAGCTG GCCGAGACCC ACGCGAAGCT CGGCGACCAC
GCCTCGGCGC TCGAGCACCT GTACCGGGCC GAGACACTGA CCGACGGGGT CGCGCCGCAC
CTGTACGCGC TGGCGCAGCG CGGGATCGCC GACAGTCTCG AGGCTTTGGG TCATCGGCAC
CAGGCACGGC TCCATTTGAT ATGTGCCCTG CGTCAGTTTG TAGAGATGGA CATGCCTGAT
GCCGATGAGA TCCGGGACCG TCTCAACCGC GACGAAGTCG CTTGA
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| Protein sequence | MEFRVLGPVE VRRDGVAVPI GGGRQKAVLA ALVCHAEDWM SRSRLLTTVW DEAPDSAAAN
LRTYLAKLRR ALADDAGSRL ELGEGRVRLR IGGGESDLRR FRDLNGRGEA AFAAGDHAEA
ARAFAEALAQ WRGEPFETAT VDRPLAALAM ELCEARAETR RRYLRVLVEL GRYDEAIAGL
RTEVTADPLA EQPIELLMLA SYRGGRPDEA LALYRDTRVR LVDELGVDPS PRLAALYERM
VSGDEPRVSR DGEAARERGT GLPRLVPAQL PADVPGFTGR DSEVEALCSA VTQRRSGALV
VSSVEGMAGI GKTALAVHAA RRLADEFPDG QLFIDLHGFD ADAPATDPAV ALERLLHSLG
VDPRQIPENL DERAGLYRSI LSDRSVLIVL DNASGEQQVG PLLPGGDASL AIVTSRRSLA
GLDQARSIQL ELLGRAEAIA LLAAALGPSR GGAGQKSVPA VEPGRFAAAD EAVAAEIVAV
CGMLPLAIRI AAARLRHRPD WTLADLRDRL QQAGLAGLCA GDRSVTAAFE MSYAELDDLA
RNAFRRLGLH PGHDFDVYTA AALCAEPADD PSEASPSRHP SLSSTQATLD ELVDVNLLIE
FRPGRYRFHD LVREFAAHKA TLDTPETRAH ARQRLGDLYL YYAGKLYAAE PIVSIGRDYR
VRAPETPTPT IPDATTALAI MDDENPNILA FIESGHDHDV GAQSVELATL QLSYLWRQAR
YNDFPARFPK LLDTAKRLGD PAAEAWLRIA QGSCLAKCGQ SEQAIDELTL ARRIGERVGQ
PDITLTATFE TAMAQIGAGR FADASMTLAE ALASRPGGDD FVEMEIRNRL AQCAFRLGDA
AGALRDLDRA IELANRRGDQ QARARFTYNS AELQLHAGNP ADTLERLSTA RDYYGPDIEP
DNLSMLLSTK AKTLLALGRP QDALDAHREA VAVATGFGDV WLLATAVVEL AETHAKLGDH
ASALEHLYRA ETLTDGVAPH LYALAQRGIA DSLEALGHRH QARLHLICAL RQFVEMDMPD
ADEIRDRLNR DEVA
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