Gene Snas_6340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6340 
Symbol 
ID8887564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6683960 
End bp6686278 
Gene Length2319 bp 
Protein Length772 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003515050 
Protein GI291303772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAAG CGTTCTTCGG CGGGCGGTGG GCTGGAAAGG CTCTCGACAG GGTCGGCCAG 
CAGTTTCGTA CGGCGGTGCT GGGGACGGAG GTGCAGCGGG CGTTGGTGCA GGCCGTGGCT
GCGGCGGTGA AGCGGGCGGC GGAGATCTTG CACGGGGAGG ATGAGGTGGG GGCGGAGAAT
CTGGTTCGGT GCCTCATGGA ACGGGACTCG CGGGAGTTGC CGCTTGTGGA CGGGACGCGG
TTGGGGGAGC TGCGGACGGC GGTGGGGCCT TGGGTGCGGG ATGTCTTTGT GCCGGTAAAT
GGGGAGTTTT CGGATGAATG GGGCGACGGG TTGGATGGGG GACAGCCCGC TGAAGCGCAT
GAGGAGCTGT CGACGGAGAT CGATGAGCTG TGTGAAGTCT TGTCGGCCGA GATCGTGGCG
GCTGTCCGGG AGAACGCGGA GACGGGTGGT GGTGAGCTGC GGGGGATATG GAGCGGGTAC
CAGTATGAGG TCACGCATCG GCAGTTGGAG GAGCTTGTTG AGGAGCGGCG GCTTTATGGT
GAGCTGAGTG AGGGACTGTG GATTGGTGGC GATGGCGTAC CGGCGCGGGT AGCTGGCGGT
GGCCTGGGTC CAAGCCGGAT CGACTATGGA CGCATCTCTA CTTCGGCTGA CCACTTTGTA
GGCCGAGTTG AGCAGCTGGC CGAACTGGAG TCGCTGCGTG CCAGCGGCAT GGTCGGCATG
GTGTGCTCGG TCGGGGGTTT TGGAGGCGTT GGCAAGACCG CGTTGGTATC GGCTTTTGCC
AAGTCTGTGG CCGACGAGTA TCCAGACGGG TTGGTGTTCG TTGATTTTCA GTCGTATCCG
GAGACGGATA GGGCGCTGCG GGCCGAGGAT GTCCTGCCTG GACTTCTGAA GCTGGGGTGT
GGCATGACGG CGCCGGTTGT TGACCGGATG AGCCGTGAAG AGCAGTTCGC GAGTTGGCAT
GCGGTGATTG ACGGACGTCG CATGATCTTT TTGTGGGACA ACGTTTTCGA GGATGAGCAG
ATCGAACCGT TGCGCGCGCG GGGCGAGGGA AGCCTGACGC TGATCACCAG CCGGAATCGG
TTCCATGTGG ATGGTGCTCG CATGTTGGAC CTGGACGTCT TGCCGCTGTC GGACGCCGTC
GCCATGTTCG CCGAGATCGC GGGAGCGGAT CGGTGCGGCG ATGTCGAAGC TGTCAAGCGG
ATCGCCAACG CGTGCGATCG AGTTCCGGTG CTGATCGGTG CGATGGCCGC GAAGCTGATG
ACCGGGATCA AGACTCTGTC GGAATTGGAC ATCGAGGTGG CCGAGCTACC CGATGCCCGC
ACGAAAGCGC GGGTCTTCAG TATCCTTGAT GACGCCTATC TTTGCCTGTC GCCGATACAG
CAGGAGATCT ACGAGCTGCT TGGCACTCAC CCTGGTCGAT ATTTGACGGT GGGTACCGTT
GCCGTGATGC TAGAGCAGGC CTTGGGGCAC GAGGTCAGTC TCGAAGAAGC AGTTGATGCT
TTGGACGCGT TGGTGGCGCG TCGGCTCGCT GACCCGCATC GAGGCGAAGT CGTGCCAGAG
GGGTTGGCGG AGTTCGCTTA CACGGCACAT GACGTGATCC TTGATCACGC GCAGTACCTT
GCGGTATCTG TCGCCGGCAA GTTCACGAAT CGTTTCAACG TCCTTTGTGC CTACTATGGA
ATGCGGCTTG ACGAACATCG GGAGAATGAG GACCGGTCCT GGTTTATCGC CGAGCATACT
GCTCTCTTGG CGGTATTCAC AAGTGTCACC GACTATCCGG AAGTCACTAT GAAACTGGGA
AATAAGCTGG ACTTCTGGGG GGCCATCTCC GACGCCAAAT CATGCTTTGA ACATGTCTAC
GACATTTATC GCGAAGCCGG GAACCGAATG GGAGAAGCCG AAGTATTGGT ACTACTTGGT
GCCGTCTCTC CCGTGGCCAG CGCGACAGAT GATCCGGTCA GTTACCTTCA AAGGGCTTAT
GACATCTATC TAGATGAAGG TGAAGTAGTC AAGGCCATCA ATTGTCGCCT CCGCATTGCA
ATGCTGACCG CCGACGATCA CATGGCGATA TCCGCGCTTG GTGAACTAAG CGATCTTTTT
CCGGAGACCT TCGTTGAGAC TACGGACGAT GAGAACGGTC GTGGGGCAGG GTTGGCGTAT
CGACGACTTC ACGATCACGT CCTCATAAAT GGTGGTGACA ACATCGCGGG CGCGACATTG
CTTGCGCTCG CAAGCATGGT GCTGGGGAGT GACGAACATT CACATACGCG AGCCGAGTAC
GAGGAAGCGA CTGGTCCCCA GGAAGAGCCA GACTTCTAG
 
Protein sequence
MVEAFFGGRW AGKALDRVGQ QFRTAVLGTE VQRALVQAVA AAVKRAAEIL HGEDEVGAEN 
LVRCLMERDS RELPLVDGTR LGELRTAVGP WVRDVFVPVN GEFSDEWGDG LDGGQPAEAH
EELSTEIDEL CEVLSAEIVA AVRENAETGG GELRGIWSGY QYEVTHRQLE ELVEERRLYG
ELSEGLWIGG DGVPARVAGG GLGPSRIDYG RISTSADHFV GRVEQLAELE SLRASGMVGM
VCSVGGFGGV GKTALVSAFA KSVADEYPDG LVFVDFQSYP ETDRALRAED VLPGLLKLGC
GMTAPVVDRM SREEQFASWH AVIDGRRMIF LWDNVFEDEQ IEPLRARGEG SLTLITSRNR
FHVDGARMLD LDVLPLSDAV AMFAEIAGAD RCGDVEAVKR IANACDRVPV LIGAMAAKLM
TGIKTLSELD IEVAELPDAR TKARVFSILD DAYLCLSPIQ QEIYELLGTH PGRYLTVGTV
AVMLEQALGH EVSLEEAVDA LDALVARRLA DPHRGEVVPE GLAEFAYTAH DVILDHAQYL
AVSVAGKFTN RFNVLCAYYG MRLDEHRENE DRSWFIAEHT ALLAVFTSVT DYPEVTMKLG
NKLDFWGAIS DAKSCFEHVY DIYREAGNRM GEAEVLVLLG AVSPVASATD DPVSYLQRAY
DIYLDEGEVV KAINCRLRIA MLTADDHMAI SALGELSDLF PETFVETTDD ENGRGAGLAY
RRLHDHVLIN GGDNIAGATL LALASMVLGS DEHSHTRAEY EEATGPQEEP DF