| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6329 |
|---|
| Symbol | |
|---|
| ID | 8887553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 6675686 |
|---|
| End bp | 6676579 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_003515040 |
|---|
| Protein GI | 291303762 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.683898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTAG GCCCGAAACT GCTCGGCGTC GCGGCGGTTG CCACCCTGGC ACTGACAGCC
TGCGCTGACG CCCCGTCCGA GGAGAAGGAC GGCGGCGGCG ACTACGCCGC CGGCGGCGTG
ACGCTGGACG CCAAACCCGA CAAGATCGTG TCGCTGTCGG CCACCGCCAC CGAGATGCTG
TTCGCCATCG ACGCGGGTGA CCAGGTCGAG GCCGTCGACT CCACCTCGAA CTACCCCAAG
GACGCGCCCA AGACCGACCT GGACGCGTTC AACCCGAACG TCGAGTCGAT CGCCGGTTAC
GAGCCCGACC TCGTCGTCGT GTCGCACGAC CAGGAGGGCA TCCGGGACAA GCTCAAGGAA
GCCAAGATCC CGACCTACTA CGCCCCGGCG GCGGCCAGCC TCGACGACAG CTACGAGCAG
ATCGAGGACC TCGGCGCGCT GACCGGCCAC CGCAAGGACG CCAAGAAGCT CACCGGCGAC
ATCGAGTCCG AGATCGACAC GATGGTGGAA CAGCTGCCCT CCCGCGAGGA CAAGCCGACC
GTCTACTACG AACTCGACGA CGACCACTAC ACCCTGACCT CCGACACCTT CGCCGGTTCG
CTGCTGAAGA AGGCGGGCCT GGTCAACATC GCCGACGGCG TCGAGGGCGC CGAGGAGACC
GGCGGCTACC CGAAGCTGAC CGGCGAGTTC ATCCTGTCGG AGAACCCGGA CTTCGTGTTC
GCCACCGGCG GCCAGACCGT CAAGGACGTC ACCGGCCGAC AGGGCTGGGA CTCCCTCGAG
GCCGTCAAGA AGAAGCAGGT CTACTCGCTG GACGCCGACG TCTCCTCACG CTGGGGCCCG
CGCGTCGTGG ACCTGATGCG TGATATCACC GACGCCGTGG CCAAGTCGAA GTAG
|
|---|
| Protein sequence | MRLGPKLLGV AAVATLALTA CADAPSEEKD GGGDYAAGGV TLDAKPDKIV SLSATATEML
FAIDAGDQVE AVDSTSNYPK DAPKTDLDAF NPNVESIAGY EPDLVVVSHD QEGIRDKLKE
AKIPTYYAPA AASLDDSYEQ IEDLGALTGH RKDAKKLTGD IESEIDTMVE QLPSREDKPT
VYYELDDDHY TLTSDTFAGS LLKKAGLVNI ADGVEGAEET GGYPKLTGEF ILSENPDFVF
ATGGQTVKDV TGRQGWDSLE AVKKKQVYSL DADVSSRWGP RVVDLMRDIT DAVAKSK
|
|---|
| |