| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6327 |
|---|
| Symbol | |
|---|
| ID | 8887551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 6673749 |
|---|
| End bp | 6674600 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003515038 |
|---|
| Protein GI | 291303760 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.641097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTCG CGAGCCCACC CCCCAGCCCA GCCAGCTCAC ACGGGGAGGC CGTCGTGACC
GCCCTGTCGG CCGAGGACGT GACGGTGCGC CTAGGCGGGG CGCTCATCGT CGACGAGGTG
TCCTTCACCG TCGAGCCCGG CGAATGGCTC ACCGTCATCG GGCCCAACGG CGCCGGGAAG
TCCACGCTGC TGCACGCCGT GGCCGGACTG CTGGCCTTCG ACGGCCGGGT GCGGCTGTAC
GGCGACGACC TCGCCGCGTT GCCGCGCCGG GAACTCGCCC GCCGGATCGC GGTGGTGGTC
CAGTCCCCGG TGGTGCCGGA GGGCATGACG GTCCTCGACT ACGTCCTGTT GGGCCGCACC
CCGCACATCC ACGCGCTCGG CCGCGAGAGC CAGCACGACG TCGACGTCGC CCTGCGGGTG
TGCGAACGGC TCGACCTGAT GCCGTTCACC ACCCGGGCGC TGGCGACGCT GTCGGGCGGG
GAACGGCAGC GGGCCATCCT GGCGCGGGCG CTGGCCCAGC TGGCCGGGAC CCGCCAGGCG
CTGCTGCTGC TCGACGAACC GACCTCGGCA CTGGACATCG GGCACCAGCA GGAGGTGCTG
GAACTGGTCG ACACCCTGCG CGCCGAGGAA GGGCTCACGG TCGTGTCGAC GATGCACGAA
CTGTCGATCG CCGGTGAGTA CGCCGACCGG CTGCTGCTGC TGGCCGCCGG ACGACTGGCC
GCGCTCGGCC CGGCCGCCGA GGTCCTCACC ACCGAGCTGC TGGCCACGCA TTACCGCGCG
AGGGTGCGGG TGATCGACTC GGAGTCGGGT CCGGTAGTCG TACCACTGCG GCCTGACCGA
CAGGAGTATT GA
|
|---|
| Protein sequence | MTLASPPPSP ASSHGEAVVT ALSAEDVTVR LGGALIVDEV SFTVEPGEWL TVIGPNGAGK
STLLHAVAGL LAFDGRVRLY GDDLAALPRR ELARRIAVVV QSPVVPEGMT VLDYVLLGRT
PHIHALGRES QHDVDVALRV CERLDLMPFT TRALATLSGG ERQRAILARA LAQLAGTRQA
LLLLDEPTSA LDIGHQQEVL ELVDTLRAEE GLTVVSTMHE LSIAGEYADR LLLLAAGRLA
ALGPAAEVLT TELLATHYRA RVRVIDSESG PVVVPLRPDR QEY
|
|---|
| |