Gene Snas_6309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6309 
Symbol 
ID8887533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6651682 
End bp6653187 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content65% 
IMG OID 
Productlysyl-tRNA synthetase 
Protein accessionYP_003515020 
Protein GI291303742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGA ATCCCAGCAC TACGGCGACC GAGGACGATA TTCCCGAGCA ACTGAAGGTG 
CGCCACGCCA AGCGCGCCGA CATGCTCGCC GAAGGCGCCA AGCCCTACCC GCTGGGAGTC
AAGCGCACCA CCACGTTGAA GCGGCTGCGC GAGGAATACG GCCACCTGGA GGCCGAGGCC
AGTACCGGCG TCATCGCCTC GGTCACCGGG CGGGTCATCT TCGTGCGCAC CGGCGGGAAA
CTGTGCTTCG CCACCATCCG CGAGGGCGAC GGCACGCAAC TCCAGCTGAT GCTGTCGCTG
GCGAAGGTGG GCGAGGAGTC GCTGGGCGAG TGGAAGCGGC TCATCGACAT CGGCGACGTG
GTCGCCGTCA CCGGTGAGGT CATCACCTCC AAGCGCGGCG AACTGTCGGT GATGGCCGAC
GAGTGGGAGA TGGCCGCCAA GGCGCTGCGC CCGCTGCCGG TCGCGCACAA GCCCATGAGC
GAGGAGACCC GGGTCCGGCA GCGCTACGTG GACCTGATCA TGCGTCCCGA GGCGCGCGAC
ACCGCCCGCA ACCGGGCCGC CGTGGTCCAC ACGCTGCGCG ACATCATGCA CCAGCGCGAC
TTCATGGAGG TCGAGACGCC GGTGCTGCAG GCCATCGCCA GCGGCGCCAA CGCCCGGCCG
TTCACGACCC ACTTCAACGC CATCAACATG GACGTGTACC TGCGCATCGC GCTGGAGCTG
TACCTCAAGC GCTGTGTTGT CGGCGGCATC GACCGGGTCT TCGAGATCAG CCGCAATTTC
CGCAATGAGG GCGCCGACTC CACCCATTCC CCGGAATTCT CCATGATGGA GGCATACGAG
GCATACGGTG ATTACCGCTC GATTGGCCGA CTCACTCGGG ATCTCGTCGT CGGTTGCGCG
GAATCGGTTT TCGGTTCCAC GACGGTCACT CACGCCGACG GCACCGAGCT GGAATTCGGC
GGAGAGTGGC GCGAGGTAAC GCTATTCGGT GCGTTGTCGG AAGCACTGGG TGAACCGGTT
TCCATCGAAA CCCCATATGA CCGACTGGTG GCTTTCGCTG AAAAAACCGA CCTGGAGGTG
AACCCGGTTT GGGGACCGGG CAAACTCGCC GAGGAACTGT TCGAGCACCT GGTGACGGAT
ACTCTGGTCA ATCCGACTTT CGTCCTCGAC TATCCAGAGG AGACCTCGCC GCTGACCGCG
GCGCATCGCG ACACTCCCGG CCTTACCGAG AAATGGGATC TGTACGTGCG CGGTGTGGAG
TTGGCCACCG GATACTCCGA GTTGATCGAC CCGGTCGTGC AGCGGGAACG CTTCGAGCAG
CAGGCCCGGC TGGCCGCCAA GGGCGACGAC GAGGCCATGA AGCTGGACGA GGACTTCCTG
CGTGCGATGG AGTACGGCAT GCCTCCCACC GGCGGGATGG GCATGGGGAT CGACCGGCTG
CTCATGGCTC TGACCGGCCT GGGTATTCGT GAAACAATCC TGTTCCCATT CGTGAAGCCC
GAGTAA
 
Protein sequence
MTENPSTTAT EDDIPEQLKV RHAKRADMLA EGAKPYPLGV KRTTTLKRLR EEYGHLEAEA 
STGVIASVTG RVIFVRTGGK LCFATIREGD GTQLQLMLSL AKVGEESLGE WKRLIDIGDV
VAVTGEVITS KRGELSVMAD EWEMAAKALR PLPVAHKPMS EETRVRQRYV DLIMRPEARD
TARNRAAVVH TLRDIMHQRD FMEVETPVLQ AIASGANARP FTTHFNAINM DVYLRIALEL
YLKRCVVGGI DRVFEISRNF RNEGADSTHS PEFSMMEAYE AYGDYRSIGR LTRDLVVGCA
ESVFGSTTVT HADGTELEFG GEWREVTLFG ALSEALGEPV SIETPYDRLV AFAEKTDLEV
NPVWGPGKLA EELFEHLVTD TLVNPTFVLD YPEETSPLTA AHRDTPGLTE KWDLYVRGVE
LATGYSELID PVVQRERFEQ QARLAAKGDD EAMKLDEDFL RAMEYGMPPT GGMGMGIDRL
LMALTGLGIR ETILFPFVKP E