Gene Snas_6280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6280 
Symbol 
ID8887504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6623670 
End bp6624524 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content64% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003514993 
Protein GI291303715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCAAC CCAAACGGCT GCGCAAACCC TGGGACGCCA CGGTTCTGAC CCGCGCCACC 
CTGATCCTGG CCGTGCTGCT GTCGATCTGG CCGCTGTACT GGATGATCGT CATCGCCAGC
CGCGACATCT CGGCGGCGAC CCGGATCCCG CCGCCGCTGC TGCCCGGCGG CAACCTGGGC
GACAACATCG TCCGGGCGCT GTCCGACGAG TCCTCGCACC TTATGGCCGG ACTGGTCAAC
TCGCTGATCG TGTCGGCGAC GGTCACCGTG TCGGTGGTGT TCATCTCCAC TTTGGCGGGT
TTCGCGTTCG CGAAGCTGCG GTTCAGGGGC AGCACGGTGC TGCTGGTGAC GGTGCTGTTG
ACGATGATGG TGCCGTTGCA GCAGATCGGT GTGGTGCCGC TGTACATCAT GATGGTCGAA
CTGGGCTGGG TGAACACACT GCAGGCGGTC ATCCTGCCGT TCCTGGTCAA CGGGTTCGGG
ATCTTCCTGA TGCGGCAGTA CACGATCCAG GCGGTACCGT CCGAACTGGT CGAATCGGCC
CGCATGGACG GCGCCTCCAC GTTCCGGATC TACTGGAACA TCGTGCTCCC GGCGGTGCGG
CCGGGCATCG CGGTACTGGC GCTGTTGACG TTCATGCAGA ACTGGAACGA GTTCCTGTGG
CCGTTGATCG TGCTGCAACC CGACAACCCC ACCGTCCAGC TGGCGATCCG GGGACTGTCG
GAGACCAACT ACGGTCAGGA CTACTCGATG ATCTTCACCG GCACCCTGTT GTCGATCGTC
CCGCTGGTCC TGGTCTTCAT CGCGTTCGGC CGCCAGATCG TGGGCGGGCT CATGGAAGGA
GCGGTAAAGG AATGA
 
Protein sequence
MKQPKRLRKP WDATVLTRAT LILAVLLSIW PLYWMIVIAS RDISAATRIP PPLLPGGNLG 
DNIVRALSDE SSHLMAGLVN SLIVSATVTV SVVFISTLAG FAFAKLRFRG STVLLVTVLL
TMMVPLQQIG VVPLYIMMVE LGWVNTLQAV ILPFLVNGFG IFLMRQYTIQ AVPSELVESA
RMDGASTFRI YWNIVLPAVR PGIAVLALLT FMQNWNEFLW PLIVLQPDNP TVQLAIRGLS
ETNYGQDYSM IFTGTLLSIV PLVLVFIAFG RQIVGGLMEG AVKE