| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6278 |
|---|
| Symbol | |
|---|
| ID | 8887502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 6621153 |
|---|
| End bp | 6622169 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003514991 |
|---|
| Protein GI | 291303713 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAC GGTCGGCGCC GACGCTGGAC ACCGTCGCCG CGCGGGCCGG GGTCGGCAGG
GGCACGGTCT CGCGGGTCAT CAACGGCTCG TCGCGGGTGA GCCAGGAAGC CCGCGACGCC
GTCAACCGCG CCATCACCGA ACTCGGCTAC GTCCCCAACC ACGCCGCCCG GTCGCTGGTC
ACCCGGCGCA CCGACGTGAT CGCTCTGGTG ATCTCCGAGA CCGAGGACCG CATGTGGGGC
GAACCCTATT TCGCCGACGT GATCCGCGGC ATCACCCGGC AGCTGTCGGA GTCGGGGCTG
CGGCTGATGT TCACCCTCGC CTCCACCGCC GAGGACCGCA GTCGCCTGGA GACCTACCTG
TTGGGCAAAC ACGTCGACGG GGCCCTGCTG ATCTCGCTGC ACGGCGACGA CCCGCTGCCC
CGGCACCTGG AGGGTTCCGG GTTGCCGGTG GTGCTGTGCG GCGCCCCCGT CGGCGAGACC
GACGTCCCGT TCGTCGACAG CGACAACCGG GGCGGCGCCC GGCAGGCCGT GGAACACCTC
GCGTCCACTG GCCGCCGCCG CATCGCCGCC ATCACCGGCC CCCAGGACAT GTCGGTGGGC
ATCGACCGGC TCACCGGCTA CCGCGAAGCC CTGCGCACCG AGGGACTCCC CGAGGACCCG
GCCCTCATGG AACCCGGCGA CTTCAGCGAA GCCGCAGGGG TGACCGCCAT GCGAGCCCTG
CTCGACCGGG TCCCCGACCT GGACGCGGTG TTCGCCGCCT CCGACCCGAT GGCCTTCGGG
GCGCTGCGGG TACTGCGCGA ACGGGGAATC CGGGTGCCCG AGGACGTGGC GGTCGTCGGC
TTCGACGACT CGCCCCGAGC CGAGCACTCC GAACCCCCGC TGACCACGGT GCGTCAGGCC
GCCGAACCGA TGGGCCGCGA GATGGCCCGA CTGATCCAGG CCCGGATCCG GGGCGAGAAC
CCCGACCCGC CCTCCACGAT CCTCAGCACC CGCCTCATCG TCCGCGAGTC CTCCTGA
|
|---|
| Protein sequence | MEKRSAPTLD TVAARAGVGR GTVSRVINGS SRVSQEARDA VNRAITELGY VPNHAARSLV
TRRTDVIALV ISETEDRMWG EPYFADVIRG ITRQLSESGL RLMFTLASTA EDRSRLETYL
LGKHVDGALL ISLHGDDPLP RHLEGSGLPV VLCGAPVGET DVPFVDSDNR GGARQAVEHL
ASTGRRRIAA ITGPQDMSVG IDRLTGYREA LRTEGLPEDP ALMEPGDFSE AAGVTAMRAL
LDRVPDLDAV FAASDPMAFG ALRVLRERGI RVPEDVAVVG FDDSPRAEHS EPPLTTVRQA
AEPMGREMAR LIQARIRGEN PDPPSTILST RLIVRESS
|
|---|
| |