Gene Snas_6244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6244 
Symbol 
ID8887467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6595946 
End bp6597202 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514958 
Protein GI291303680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.699378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCCAA TTGACCCATG GACTGGCGAT GGCCTATGCC ACCTTCAAGA GTTGGTAAAC 
CTTCCGAACG AGCGATTTGC TGCTCGTGTG CGCGTGTCAA CTCGTACGAT TGCGAACTGG
CGCAAGCAAA AGCGTCAGAT ACTTCCGCGA CTTGCCCAAC GTTCGCTCAC GGAGCTGTTG
GATGAACTTC CTGAGCCGCT ACAGCAGAAG TTTCGCCAAG CGGTTCAACG GGGCGTGCCT
ACCCCTGAGA CCACAGTTTC GGATCTTGTC ACCGTTGCGT CCGAGGATGC CTTGCTAGAT
GTGCAGCGGT ACAGCCTCGA TTCCGCATCC GAGGTTTTGG AGACCCTTTC AGAGGACTCG
GCCGCTATTG CGCGAGGATC ACGGCGAACA GCACGCCAGG CGTTTAGGGC AGCGCAATCA
GTTGCGGACC AAGCGCGGCA ACTTATCGAG AAGACACATC GGCCTAGCTT GTTGTCCGAT
TTGTATGTAG TTGTCGGCCA GACGAACGCC CTCATGGCTT CCAGCGCTTT CGACCTGGGG
CATTGGGACG CGGCGGACCA CATCGCTCGC GCAGCAGCCA TTTATGCGTC GATGGCTGGC
CACTCATCTC TGGAGGCATG GGTTTTGGGA TTGCAAGCCT CTATGGCCAA CTGGCGTGAA
GAACCAGACA CTGCCCTTGC CCTACTGCGG AAAGCCCAAA CCATCGCACC TTCAGGAGAA
CCGTCGGTTC GGGTGAAATA CATAGCGGCG CGCTCGTATG CCCTTGTCGG GGACATCTAC
GGCATCCAGG ACACACTCCA AAGTGCACAA GATGACGTTG ACCGTGCATC AAGTAACAAG
GATCCGCTGA GCCATTACAC TGGCGGAGAG TTTGCATTCG GAGCCGCGCG TGCCGCAGCT
TGCGCAGCAG CTGCGTGGTT GGACGTCGGT GAAGGAACCC AGGTGGTGCA CCAGGCAAAC
GCCGCATTGG AAGAGATGCA AGCACTTCCC GCCGGGAGGC AATCACTTTC TCAGATCAGC
GGAACCCGAA TAGATCTAGC AGCTGGTCGT TTGTTGTCAC GCGATCGAGA TGGTGCCTTG
GAGGCGCTGA GACCGGTCCT CAGTGTTCCC ACGTCTGCGA GAAACATTTC GCTGACAGGT
CGGTTGACCC GGGTAAAGGA CATCCTTCAG TCGGAGCTTT GGCGGAGTGA CGCCGAAGCT
CAAGAAGTAG CCGATGAAGT TCAAGACTGG CTAACAACAA GCTCAGTTGG CAACTGA
 
Protein sequence
MDPIDPWTGD GLCHLQELVN LPNERFAARV RVSTRTIANW RKQKRQILPR LAQRSLTELL 
DELPEPLQQK FRQAVQRGVP TPETTVSDLV TVASEDALLD VQRYSLDSAS EVLETLSEDS
AAIARGSRRT ARQAFRAAQS VADQARQLIE KTHRPSLLSD LYVVVGQTNA LMASSAFDLG
HWDAADHIAR AAAIYASMAG HSSLEAWVLG LQASMANWRE EPDTALALLR KAQTIAPSGE
PSVRVKYIAA RSYALVGDIY GIQDTLQSAQ DDVDRASSNK DPLSHYTGGE FAFGAARAAA
CAAAAWLDVG EGTQVVHQAN AALEEMQALP AGRQSLSQIS GTRIDLAAGR LLSRDRDGAL
EALRPVLSVP TSARNISLTG RLTRVKDILQ SELWRSDAEA QEVADEVQDW LTTSSVGN