Gene Snas_6229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6229 
Symbol 
ID8887451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6580420 
End bp6581730 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content71% 
IMG OID 
ProductD-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase 
Protein accessionYP_003514943 
Protein GI291303665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGTCGG TGCTCGTGGC GGCGGGAGTG GTCTTCGTCA CCGTCGACAC CCGCCCGGCG 
TCGGCGCTGC TGTCGTTCCC GGAGATGGCC CCGCCCAAGG CCCCCGGGGC GCCCGAGGGT
CTGGACGCCG ACGCGCCCGC CGTCGACGCC GACGCGCTGG CCGCCGAGCT GGATCCGCTG
ATCAACGGCG GTTCGCTCAA GGGCAAGACC ACCGCCACCG TGCTGGACGG GTTCACCGGT
GAGTCGCTGT ACGCCTCGCA AGGCGACAAA GCGGCCACCC CGGCCTCGTC CACGAAGGTC
GCCACCGCCG CGGCCGCGCT GACCGCACGC GGGCCCGCGT ACCGCATCCC CACCAAGGTC
GTCGAGGGCG AATCCGAGGG CGAGGTGGTG CTGGTCGCGG GCGGCGACGT CATGCTCTCC
AAGGACGGCG ACGGCTTCTT CCGGGGCGCG GCGAGCCTGG CGGACCTGGC CGAACAGGTC
AAGAAAGCCA TGGGGGACAA GCAGATCACC AAACTCGTGG TCGACATGTC GATCTTCGCC
GACGACCCGG TCGCCCCCGG TGTCCCGGCC GCCGACGTCG CCTCGGGCTA CACCGCGAAA
CTCGAACCGA TCATGTTGGA CGGTGGCCGC TCCGGCCCCG ACCCGGGTTC GCGCGCCGCC
CGCCACGACG ACCCGTCCGC AGCCGTCACC GACGCCCTCT CCGAACTGCT GGGCGGCGTC
GAGGTCGCCG AGGGCACCGC CAAGAAGGAC GCGGCGGAAC TGGGCGTCGT CCACTCGCCG
ACCATGCAGC GGCTCGCCGA GTTCGCGCTG GTCACCAGCG ACAACCTGCT GGCCGACGCG
CTGGCCCGCC AGACCGCGCT GGCCAAGGAC AAGGACGCGT CCTTCGCCGG CGGCGTCGAG
GCCACCATCG ACGTCCTGTC CGACATGGAC GTCCCGATGG ACGGCGTCGA ACTGTCCGAC
AACAGCGGCC TGTCCCTCGA CAACCGGCTC ACCAGCGACG CGCTCGCCGC CGTCGTCTAC
CAGGCCGCCA ACGGCAAGCA CACCGCCGCC AGCGGCATCC TCGCCGGTTT CCCGGTCTCC
GGCTACAGCG GCGCCCTGGA CGACCGCTAC GACGACGCCG ACGTGGTCGG CAAGGTCCAC
GCCAAGACCG GCACCCTGAC CACGGTCAAC TCGCTGACCG GCATGACCGT CACCAAGGAG
GGAAGGCTGC TGGCCTTCTC GATCATCTTC AACGGCAAGG GCAACGGCCC CGACGTCGAA
GCGGCCATCG ACGAGGTGGC GTCCACACTG TCGCGGTGCG GTTGCGCGTG A
 
Protein sequence
MVSVLVAAGV VFVTVDTRPA SALLSFPEMA PPKAPGAPEG LDADAPAVDA DALAAELDPL 
INGGSLKGKT TATVLDGFTG ESLYASQGDK AATPASSTKV ATAAAALTAR GPAYRIPTKV
VEGESEGEVV LVAGGDVMLS KDGDGFFRGA ASLADLAEQV KKAMGDKQIT KLVVDMSIFA
DDPVAPGVPA ADVASGYTAK LEPIMLDGGR SGPDPGSRAA RHDDPSAAVT DALSELLGGV
EVAEGTAKKD AAELGVVHSP TMQRLAEFAL VTSDNLLADA LARQTALAKD KDASFAGGVE
ATIDVLSDMD VPMDGVELSD NSGLSLDNRL TSDALAAVVY QAANGKHTAA SGILAGFPVS
GYSGALDDRY DDADVVGKVH AKTGTLTTVN SLTGMTVTKE GRLLAFSIIF NGKGNGPDVE
AAIDEVASTL SRCGCA