| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6224 |
|---|
| Symbol | |
|---|
| ID | 8887446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 6574825 |
|---|
| End bp | 6575658 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Membrane-bound lytic murein transglycosylase B-like protein |
|---|
| Protein accession | YP_003514938 |
|---|
| Protein GI | 291303660 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.678228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCCG ACGGACGGAT CGTCACCCAG GGGGCGCTGA CGCTGGCGGT GCTTGCCGGA
GTATTCGGGT TGGCCGTCTA CGCCGTCCCG CATATTGGAC CCGATTGGGC CTATGGCGCC
GACGCCGAGG ACACCAGTGC CGCCGCCGAC GAGACCGAGC AGCCGCTGGC GCTGCCGCCC
GGCCTCGACT CGGCGCCCGG CGGCGGCGAC GCGCCCACCA CCGACGAACC CAGCGACAGT
CCCAGCCCCG GCGACCAGAA CACCGGCACC GAGGCGCTGC GCACCTGGGC GGAGTCGCTG
AAGGGCCTGG TGGACATCGA CCCGCGCGCC ATCATGGCCT ACGGCAACGC CGAACTGGTG
CTGGCGCAGG AGAAGCCGGA CTGCAAGCTG TCGTGGACGA CGCTGGCGGG CATCGGCAAG
GTCGAGACCA ACCACGGCAC CACGAACGGC ACCACTTTGG ACGATGCTGG TCGTCCGAAG
AAGCCCATCC GGGGCCCGGC CCTGGACGGC ACCAACGGCA ACAAGGAGAT CCGCGACACC
GACGGCGGCA AGTACGACGA CGACACCACC TACGACCGCG CGGTCGGTCC GATGCAGTTC
ATCCCCTCGA CGTGGGAGCG CTGGATGGAC GACGCGGACG GTGACGGGCA GGCCGATCCC
AACGACATCG ATGACGTGGC GGTCGTGGCC GGATACTATC TGTGTGCGGA TGGACGCGAT
CTGACGCAGG CCGAGGACTG GTACGCCGCG ATCTTCTCCT ACAACCACAA GGATTCCTAC
GTCCGCAACG TGTACGACAA TGCCGACGCG TACGGCCGTG CCAGCAAGGC TTGA
|
|---|
| Protein sequence | MRPDGRIVTQ GALTLAVLAG VFGLAVYAVP HIGPDWAYGA DAEDTSAAAD ETEQPLALPP
GLDSAPGGGD APTTDEPSDS PSPGDQNTGT EALRTWAESL KGLVDIDPRA IMAYGNAELV
LAQEKPDCKL SWTTLAGIGK VETNHGTTNG TTLDDAGRPK KPIRGPALDG TNGNKEIRDT
DGGKYDDDTT YDRAVGPMQF IPSTWERWMD DADGDGQADP NDIDDVAVVA GYYLCADGRD
LTQAEDWYAA IFSYNHKDSY VRNVYDNADA YGRASKA
|
|---|
| |