| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6212 |
|---|
| Symbol | |
|---|
| ID | 8887434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6564214 |
|---|
| End bp | 6564999 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_003514927 |
|---|
| Protein GI | 291303649 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.464717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.761019 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGTT ACGCGCGGTG GAACACGCTG TTGGAGATCC TGGCCTCGTC CGGACGGATC
ACTGTGGAGG AAGCAGCCCA GCGGCTGCAC GTCTCCCAGG CGACGATCCG CCGCGACTTC
GACCAGCTGT CACAACAGCA GATGATCACC CGCACCCGCG GCGGCGCCGT CGCCGGTGGA
GTCTCCTACG ACCTGCCACT GCGCTACAAG ACCGCCAAAC GCGTCGAGGA GAAACACCGC
ATCGGCTCGG CGGCGGCGGG CCTGGTCTCG TCGGGAATGG TCGTCGGCCT CAACGGCGGC
ACCACCATCA CCGAGGTCGC CCGGGCACTG GCGATGCGCA CCGACCTGGT CGCGACCTCG
GGCACGACGC CACTGACCAT TGTGACCAAC GCGCTGAACA TCGCCAACGA GATGATCGTG
CGGCCGCACA TCAAGGTCGT GGTGGTCGGC GGCGTCGTCC GTCCACAGTC CTATGAGCTG
ATCGGACCGC TGGCGGCGCC GATCCTGCGC GAGATCACCC TGGACATGGT GTTCCTCGGC
GTGGACGCGA TCGACGTGAA ACTGGGCGCG ACCGCGCACC ACGAGGGCGA GGCGGCGATC
AACCAGCTGA TGGCCGCACG GGCCCGCAAG GTGGTCATCA TCGCGGACGG GTCCAAACTG
GGCGGTCACG CGTTCGCACG GATCTGCCCG ATCGAGCGGG TGCACACCCT CATCACCGAC
ACCTCGGTCC CGGCGGAGCG GACCGCGGAG TTCAGCGCGG CCGGCATCAA GGTGCTGCGC
GCGTGA
|
|---|
| Protein sequence | MDRYARWNTL LEILASSGRI TVEEAAQRLH VSQATIRRDF DQLSQQQMIT RTRGGAVAGG
VSYDLPLRYK TAKRVEEKHR IGSAAAGLVS SGMVVGLNGG TTITEVARAL AMRTDLVATS
GTTPLTIVTN ALNIANEMIV RPHIKVVVVG GVVRPQSYEL IGPLAAPILR EITLDMVFLG
VDAIDVKLGA TAHHEGEAAI NQLMAARARK VVIIADGSKL GGHAFARICP IERVHTLITD
TSVPAERTAE FSAAGIKVLR A
|
|---|
| |