Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6198 |
Symbol | |
ID | 8887420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6552753 |
End bp | 6553334 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003514914 |
Protein GI | 291303636 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.533125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.545762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGAACG ACAGCGACGA GCCCGCGACC CGGCCAAAAC GCGCCGACGC CCGGCGCAAC CAGCAGACCC TGCTCGACGC CGCCGCCGAG GTCTTCGTGG CCTCGGGAGT CGAAGCCCCG GTACGCGACA TCGCGGCCAA GGCGGGCGTC GGCGTGGGCA CGATCTACCG CCACTTCCCC ACCCGGGCGG AACTCGTCAT CGCCGTCTAC CGGCACCAGG TCGACGCGTG CGCCGAAGCC GGACCCTCGC TGCTGGCCAG CAGCGCCACC CCCTATGCCG CACTGGGGCA GTGGATCGAC CTGTTCGTCG ACTTCCTGGC CACCAAGCAC GGGCTCGCCG CCGCGCTGCG GTCCGACGCG CAGTTCGAGA CGCTGCACTC GTACTTCATC GACCGGCTCG TCCCGGTGTG CACCCAGCTG CTCGACGCCG CGAGCCAGGC CGGACAGATC CGCAGCGATG TGGAAGCGTA CGAACTCATG CGCGGCGTCG GGAACCTGTG CATCGGCGCC GACAACGACC GCCGTTACGA CGCGCGTCGG CTGGTCGGCC TGCTCATCGC AGGGCTGCGG CGACCCGATT AG
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Protein sequence | MVNDSDEPAT RPKRADARRN QQTLLDAAAE VFVASGVEAP VRDIAAKAGV GVGTIYRHFP TRAELVIAVY RHQVDACAEA GPSLLASSAT PYAALGQWID LFVDFLATKH GLAAALRSDA QFETLHSYFI DRLVPVCTQL LDAASQAGQI RSDVEAYELM RGVGNLCIGA DNDRRYDARR LVGLLIAGLR RPD
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