Gene Snas_6171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6171 
Symbol 
ID8887393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6529367 
End bp6529708 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514887 
Protein GI291303609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAG AGCGTTTCGA GGAACTGGTG TCGGACGCGC TCGATCTGGT GCCTCCCGCC 
CTTATGGACA ATCTCGACAA CGTGGTGGTG TTGGTCGAGG CCGAGCCGCC GGGTGACGAC
AAACACCTTC TTGGCCTGTA CGAGGGCTAT GCGCTACCCG ATCGCGGGTG GGACTATGGC
GGGGTGCTGC CCGACAAGAT AACGATCTTC CGCGGCCCGC TGTTGCGGAT GTGCCAGACC
GAGGAAGAGG TCGTCGACGA GGTGACCATC ACCGTCGTCC ACGAGATCGC CCACCACTTC
GGCATCGACG ACGCCCGGCT CCACGAACTG GGCTGGGGCT GA
 
Protein sequence
MSEERFEELV SDALDLVPPA LMDNLDNVVV LVEAEPPGDD KHLLGLYEGY ALPDRGWDYG 
GVLPDKITIF RGPLLRMCQT EEEVVDEVTI TVVHEIAHHF GIDDARLHEL GWG