| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6166 |
|---|
| Symbol | |
|---|
| ID | 8887388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6523969 |
|---|
| End bp | 6525084 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_003514882 |
|---|
| Protein GI | 291303604 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCG AGGGCCTGGA ACTGCACCGG GTCACCCTGG AACTGATCAC CCCGTTCGAC
TCCGCCTACG GCCGCGAGAC CCATCGCGAA CTCGTGTTGC TGCGGCTCGT CACCTCCGAG
GGCGAGGGTT GGGGCGAGTG CGTCGCCGAC ACCACGCCCT GGTTCAGCAG CGAATACCAC
GACGGCGCGA TCGACATGAT CGCCAACCAC TTCCTGCCCG CGCTGTGTGC CGCCCCGCTG
CCGAGCGCGC ACGCCGTCGC GCCCCGGCTG GCCCGGTTCA AGGGCAACTA CATGGCCAAG
GCCGCCATCG AGATGGCCGT GCTGGACACG GAGCTGCGGG CCCTGGGCAT GCCGCTGGGC
CGATACCTCG GGGCAGTCCA CGAGACGGTG CCCGCCGGAG TCTCGGTCGG CATGGCCGAC
ACAGTGGACG AACTCGTGGA CGACGTGGCC GGATACCTGG AGCAGGGCTA CCACCGCATC
AAGCTCAAGA TCAAACCCGG CTGGGACGTG GCCCCGGTGC GGGCGGCGCG GGAGCGCTTC
GGCGACGAGC TGGAGTTGCA GGTCGACGGC AACACCTCCT ACCGGCTGTC CGACGCCGAG
CACCTGGCCA GACTGGACGA TTTCGGGCTC CGGCTGATCG AGCAGCCGCT GCCCGACGAG
GACCTGCTGG GGCACGCGCG ACTGGCGAAA CGGCTGCGCA CCCCGATCTG CCTCGACGAG
TCCATCGTGT CCGCGAAGTC GGCGGCCGAC GCCATCACGC TGGGCGCCGC GTCCATAGTG
AACATCAAGC CGGGTCGGGT CGGCGGGTAC CTGGAAGCCC GCCGGGTGCA CGACATGTGC
GCCGCCCACG GTGTTCCGGT GTGGTGCGGC GGCATGCTGG AGACCGGCAT CGGCCAGTCC
GCGAACATCG CGCTGGCGGC GCTGCCGAAC TTCACCCTCC CCGGCGACAC CTCCGCCTCC
GACCGGTACT TCACCCGCGA CCTCGTCGAC GTGCGGCTGG AGCCGGGCGG CATGGTACGG
GTGCCGACCG GCCCGGGCAT TGGCGTCATC CCCGACCCGG ACGCCCTGAC CGACCTGACC
ACCTGGCGAA AGTGGATCGA CGCGCCGTCA CGCTGA
|
|---|
| Protein sequence | MRIEGLELHR VTLELITPFD SAYGRETHRE LVLLRLVTSE GEGWGECVAD TTPWFSSEYH
DGAIDMIANH FLPALCAAPL PSAHAVAPRL ARFKGNYMAK AAIEMAVLDT ELRALGMPLG
RYLGAVHETV PAGVSVGMAD TVDELVDDVA GYLEQGYHRI KLKIKPGWDV APVRAARERF
GDELELQVDG NTSYRLSDAE HLARLDDFGL RLIEQPLPDE DLLGHARLAK RLRTPICLDE
SIVSAKSAAD AITLGAASIV NIKPGRVGGY LEARRVHDMC AAHGVPVWCG GMLETGIGQS
ANIALAALPN FTLPGDTSAS DRYFTRDLVD VRLEPGGMVR VPTGPGIGVI PDPDALTDLT
TWRKWIDAPS R
|
|---|
| |