Gene Snas_6158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6158 
Symbol 
ID8887380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6515023 
End bp6515754 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514874 
Protein GI291303596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.789066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCGA TCCTGGGAGT CGTCTCCCCG TTCGCGGGCA CAAGCCTCAG CGCGACCGGC 
GGTCAACAGG CACAGTGGAG CGCCCGAGTT GAACTGGTCT GCTGGCAGCC GCTGGACGGG
GATCCGGTGG CGCGGCGGCT GACGCTGCGG AGCACGGCAC GACCCCGGGA CGAGGCGTCC
GGGTTGATCG CCGGGTTCAC CGGATACGAC GTCGTGAGCT GCGAACATCG CGACGGCGTC
TTGTTGCGCC GCCCCGAACT CGCGGTTCCA CCGCCACGGC TGGCAGCGAT GCTGGAACAG
TTGCGTCGGC CCCGCACCGT GGGCCATCGG CTCGGGGAGT TCACGTACAC ACTCGAATCC
GACGCCTTCG ACGGTGAGTC GGACATCGAT GGACCGGTTC AGGTGCGCCT GAACACCGCC
GAGGCCGCGA CCGCCTGCCG CATGCTCGAC GAGCTGGCCG ACGCGCTGGC TAGTGGGCGG
TTGACCCGGC GGAACCTCGC CGACCGGGCC GTCACCGAAC TGTTCGACCT CGCCAACGAC
GAGTGGCTCG ACGAGGACGA GCGCGTGACC GCCGCGGAAT TCCGGCGGCG CATGGTGCTC
AGCGAAATCA CGGTCGACGA TGGTGGCGAC TTCGAGGCGT ATCACGACGA CGGCGAGCTG
TTCGCCGGAC ACGTGATCCT CGTCCAGGGA ACGCTCGCCG AAGGCCCGAG CGAGGCGACG
CTCGCGGGCT AG
 
Protein sequence
MVSILGVVSP FAGTSLSATG GQQAQWSARV ELVCWQPLDG DPVARRLTLR STARPRDEAS 
GLIAGFTGYD VVSCEHRDGV LLRRPELAVP PPRLAAMLEQ LRRPRTVGHR LGEFTYTLES
DAFDGESDID GPVQVRLNTA EAATACRMLD ELADALASGR LTRRNLADRA VTELFDLAND
EWLDEDERVT AAEFRRRMVL SEITVDDGGD FEAYHDDGEL FAGHVILVQG TLAEGPSEAT
LAG