Gene Snas_6153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6153 
Symbol 
ID8887375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6512278 
End bp6513306 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content68% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter ATPase subunit 
Protein accessionYP_003514869 
Protein GI291303591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.798522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTT TGGAACTGGA GGACCTCAAG GTCCACTTCC CCATCAAACG GGGCGTCATC 
TTCGACCGCA CGGTCGGCCA CGTCTACGCG GTCGACGGGG TCTCCCTGTC GGTGGAGTCG
GGCCAGACCT ACGGTCTGGT CGGCGAATCC GGCTGCGGCA AGACGACGCT GGGCCGGGCG
GTACTGCGGC TCAACGAGAT CACTAGCGGC GCGGTCAAGT TCGACGGCAC CGACCTGGCA
CAACTCCCCC GCGAACAGAT GCGCCAGGCC CGACGTCGAC TGCAAATGGT GTTCCAGGAC
CCCATGGGCA GCCTCGACCC CCGCCAAAAC GTCGAGTCCA TTCTTGTCGA AGGTCTCCAC
GCGCACGGCA TCGGCAGCAA CCGAACCGAA CGGCGGCAAC GCATCCAACG CACCCTCGAC
GCGGTCGGCC TCCCCTCCGC CGCCCTGGCC CGCTACCCGC ACGAGTTCTC CGGCGGCCAG
CGACAGCGCA TCGGCATCGC GCGGGCCCTG GTCCTGGAAC CGGACCTGAT CATCTGCGAC
GAGCCCGTCT CGGCCCTCGA CGTGTCCATC CAGGCCCAGG TCCTCAACCT GCTCGAGGAG
ATCCAGGACG AACTGGGCCT GACCTACCTG GTCATCGCGC ACGACCTGGC GGTCGTGCGG
CACATCAGCG ACGTCATCGG CGTCATGTAC CTGGGTTCGC TCGTCGAGGA GGCGGGCAGC
GACATGCTGT ACGCCGAACC CAAGCACCCG TACACAAAAG CACTCATGTC GGCGGTCCCG
GTCCCCGACC CGCAGGTCGA GGACGCCCGG GAACGCATCC TGCTGTCGGG CGACCTCCCC
TCCCCCGCCG CACCCCCACC CGGCTGCCGC TTCCACACCC GCTGCCCGTG GAAGCAGGAC
ACGTTGTGCG CCACCGAAAG ACCCCAACTC CGGGTGCTGT CGGAGGGCCA CAAGGTCGCC
TGCCACTGGG CCGAGAAGAT CGAGGCGGGC GAGATAACCC CACGCAGCGA GGCGGTCATC
TCCGCCTAG
 
Protein sequence
MSLLELEDLK VHFPIKRGVI FDRTVGHVYA VDGVSLSVES GQTYGLVGES GCGKTTLGRA 
VLRLNEITSG AVKFDGTDLA QLPREQMRQA RRRLQMVFQD PMGSLDPRQN VESILVEGLH
AHGIGSNRTE RRQRIQRTLD AVGLPSAALA RYPHEFSGGQ RQRIGIARAL VLEPDLIICD
EPVSALDVSI QAQVLNLLEE IQDELGLTYL VIAHDLAVVR HISDVIGVMY LGSLVEEAGS
DMLYAEPKHP YTKALMSAVP VPDPQVEDAR ERILLSGDLP SPAAPPPGCR FHTRCPWKQD
TLCATERPQL RVLSEGHKVA CHWAEKIEAG EITPRSEAVI SA