| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6119 |
|---|
| Symbol | |
|---|
| ID | 8887340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 6480971 |
|---|
| End bp | 6481495 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003514836 |
|---|
| Protein GI | 291303558 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCAAC GCCCCCCGCC GAACCCCAGG TTCGACGAGT TCGTGCGCGC CCGCAGCGCG
TCGCTGCTGC GGGCCGCTTT CCTGTTGACG GGCGGCGACC AGCACCAGGC CGAGGACCTG
GTGCAGTCGG CGCTGGCGCG CACCCTGCGC GCCTGGTCGC GGCTCGAACG CGAGGACAAC
GCGGAGGCGT ACACCCGCAA GACCATGTAC CACCTACAGG TGGGCTGGTG GCGGCGCCGA
GCGCGCGAAC GCCGGGCCAA CAAACTGCTC CATCCACAGG AGATCGTGGC GGACGGCGCG
GACGACGTGC TGCGGCGGCT CGCCCTCAAG TCGGTACTGC GGCGGCTCAC CCCGAAACAA
CGCGCCGTAC TGGTGCTGCG GTTCTACGAG GACCTCAGCG TCGCCGAGAC CGCCGACGTC
CTGGAGTGCA GCCCCGGCAC CGTCAAGAGC CAAACCGCGA AGGCTCTGAC GTTGCTGCGC
GATCGGGCAC CACAGCTGCG GGAACTGCGA AGGGCATGGA CATGA
|
|---|
| Protein sequence | MYQRPPPNPR FDEFVRARSA SLLRAAFLLT GGDQHQAEDL VQSALARTLR AWSRLEREDN
AEAYTRKTMY HLQVGWWRRR ARERRANKLL HPQEIVADGA DDVLRRLALK SVLRRLTPKQ
RAVLVLRFYE DLSVAETADV LECSPGTVKS QTAKALTLLR DRAPQLRELR RAWT
|
|---|
| |