Gene Snas_6117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6117 
Symbol 
ID8887338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6479723 
End bp6480235 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content68% 
IMG OID 
ProductRNA polymerase sigma-24 subunit, ECF subfamily 
Protein accessionYP_003514834 
Protein GI291303556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC ACCGGTCGGA CTTCGAGGAG TTCGCGATCG CGTGTACCCC GGCGCTGCTG 
CGGTCGGCGT ACCTGCTCAC GGGGGACCAG CACCTCGCCG AAGACCTGGT GCAGTCGGCC
CTGGCGCGCA CCCACCGGGC GTGGAAACGC CTGGAACACT CCGGCAACGC CCACGCCTAC
ACTCGCAAGA TCATGTACCA CCTCCAGGTG TCGTGGTGGC GGCGTCGCAA AGTCGCCGAG
AGCTTCACCG AGACCCCCGT CGAGACCGCC TTCGCCGACT CCACCCACGA CGTCGACCTG
CGACTGAGCC TGCGCGCGGC GCTGTTCCAG CTCGCCCCCC GGCAACGCGC CGTCATCGTG
CTGCGGTACT TCGAGGACCG CTCCGTCACC CAGACCGCCG AGATCCTCGG CTGCGCGGAG
GGAACGGTCA AGACCCAGGC CTTCCGCGCC CTCAACAAAC TCCGATCCGT GCTGCCCGAC
CTCGTCGAAC TGACCAACGG AGAGCTGGCA TGA
 
Protein sequence
MTRHRSDFEE FAIACTPALL RSAYLLTGDQ HLAEDLVQSA LARTHRAWKR LEHSGNAHAY 
TRKIMYHLQV SWWRRRKVAE SFTETPVETA FADSTHDVDL RLSLRAALFQ LAPRQRAVIV
LRYFEDRSVT QTAEILGCAE GTVKTQAFRA LNKLRSVLPD LVELTNGELA