Gene Snas_6115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6115 
Symbol 
ID8887336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6476591 
End bp6478219 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content67% 
IMG OID 
Productchaperonin GroEL 
Protein accessionYP_003514832 
Protein GI291303554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.972014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGA TCATCGCTTT CGACGAAGAG GCTCGCCGCG GGCTCGAGCG GGGAATGAAC 
GCCCTCGCCG ACGCCGTCAA GGTGACCCTC GGTCCCAAGG GCCGCAACGT CGTTCTCGAC
AAGAAGTGGG GCGCCCCCAC GATCACCAAC GACGGTGTAT CCGTCGCCAA GGAGATCGAG
CTGGAGGACC CGTACGAGAA GATCGGCGCC GAGCTGGTCA AAGAGGTCGC CAAGAAGACC
GACGACGTAG CCGGGGACGG CACCACCACC GCCACCGTCC TTGCCCAGGC CCTGGTGCGT
AACGGGCTGC GCTCGGTCGC CGCCGGCGCC AACCCGATCG CGCTCAAGCG CGGCATCGAG
GCCGCCGTGG CCGCCGTCGC CGAGGAACTG GCCAAGCTGT CCAAGGACAT CGAGTCCAAG
GACCAGATCG CCGCCACCGC CTCGATCTCG GCCGGTGACA ACAGCGTCGG CGACATCATC
GCCGAGGCCA TGGACAAGGT CGGCAAAGAG GGTGTCATCA CCGTCGAGGA GTCCAACACC
TTCGGCCTGG AGCTCGAGCT CACCGAGGGC ATGCGCTTCG ACAAGGGTTA CATCTCCGGT
TACTTCGTGA CCGACCAGGA GCGCATGGAG ACCGTCCTGG AGGACCCGTA CCTCCTGATC
GCCAACTCCA AGATCTCCGC GGTCAAGGAC CTGCTGCCCA CCCTCGAGAA GATCATGCAG
GGCGGAAAGT CCCTCGTGAT CATCGCCGAG GACGTGGAGG GCGAGGCCCT GGCCACCCTG
ATCGTCAACA AGCTCAAGGG CACCTTCAAG TCCGCCGCCG TCAAGGCTCC GGGCTTCGGT
GACCGCCGCA AGGCCATGCT GGGCGACATC GCCACCCTCA CCGGTGGTCA GGTCATCAGC
GAGGAGCTGG GTCTCAAGCT GGAGAACGCC ACCATCGACA TGCTGGGCAA GGCCCGCAAG
GTGGTCATCA CCAAGGACGA GACCACCATC GTGGACGGTG CCGGTGACCA GGCGCAGATC
GACGGCCGGG TGGCCCAGAT CCGCGGCGAG ATCGAGAACT CCGACTCCGA CTACGACCGC
GAGAAGCTCC AGGAGCGTCT CGCCAAGCTG GCCGGCGGCG TGGCCGTCAT CAAGGTCGGC
GCGGCCACCG AGGTCGAGCT GAAGGAGCGC AAGCACCGCA TCGAGGACGC CGTCCGCAAC
GCCAAGGCCG CCGTCGAAGA GGGCATCGTC CCCGGTGGTG GCGTGGCGCT GGTCCAGGCC
GGCACCACCG CGTTCGACAA GATCGAGCTC GAGGGTGACG AGGCCACCGG TGTCCAGCTG
GTGAAGAACT CGCTGTCGGC TCCGCTGCAG CAGATCGCCG CCAACGCCGG TCTCGAGGGT
GGCGTGGTCG CCGAGCGCGT CCGCAACCTC CCCGCCGGTC AGGGCCTCAA CGCCGCCACC
GGCGAGTACG TGGACATGCT GGAGGCTGGC ATCAACGACC CGACCAAGGT GACCCGTTCC
GCGCTGCAGA ACGCCGCCTC GATCGCCGGT CTGTTCCTGA CCACCGAGGC CGTCGTGGCC
GACAAGCCCG AGAAGGAGGC CGCCCCCGCC GGTGGCGCTC CCGACATGGG CGGAATGGGC
GGCTTCTAG
 
Protein sequence
MAKIIAFDEE ARRGLERGMN ALADAVKVTL GPKGRNVVLD KKWGAPTITN DGVSVAKEIE 
LEDPYEKIGA ELVKEVAKKT DDVAGDGTTT ATVLAQALVR NGLRSVAAGA NPIALKRGIE
AAVAAVAEEL AKLSKDIESK DQIAATASIS AGDNSVGDII AEAMDKVGKE GVITVEESNT
FGLELELTEG MRFDKGYISG YFVTDQERME TVLEDPYLLI ANSKISAVKD LLPTLEKIMQ
GGKSLVIIAE DVEGEALATL IVNKLKGTFK SAAVKAPGFG DRRKAMLGDI ATLTGGQVIS
EELGLKLENA TIDMLGKARK VVITKDETTI VDGAGDQAQI DGRVAQIRGE IENSDSDYDR
EKLQERLAKL AGGVAVIKVG AATEVELKER KHRIEDAVRN AKAAVEEGIV PGGGVALVQA
GTTAFDKIEL EGDEATGVQL VKNSLSAPLQ QIAANAGLEG GVVAERVRNL PAGQGLNAAT
GEYVDMLEAG INDPTKVTRS ALQNAASIAG LFLTTEAVVA DKPEKEAAPA GGAPDMGGMG
GF