Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6089 |
Symbol | |
ID | 8887310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6443892 |
End bp | 6446180 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ATP-dependent DNA helicase PcrA |
Protein accession | YP_003514806 |
Protein GI | 291303528 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.352093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCTC TCTTCGAAAC CGCGCTTCCC GCTTCCGGTT CGGCCGCCGA TTCCCTGCTC GACGGGCTCA ATGACCCGCA GCGGCAGGCT GTCCTGCACG AGGGCCCGCC GCTGTTGATC GTGGCGGGAG CCGGTTCCGG CAAGACCCGG GTGCTGACGC AACGCATCGC GCACCTGGTG GCCGTCCGGG GTGTGCACCC CGGGGAGATC CTGGCGATCA CCTTCACCAA CAAGGCCGCC GCCGAGATGC GGGATCGGGT CTCAAGCGTG GTCGGCAACC GGGCCCGGAT GATGTGGGTG CTGACCTTCC ACGCCGCGTG CATGCGGATC CTGCGGCGGG AGCACGAGCG GCTGAACCTG AAGTCCACCT TCACCGTCTA CGACTCCGAC GACTCGCGGC GGCTGATGCA GCAGGTGGCC CGGGACATGG AGCTGGACAA GCGCCACACC CCCCGGGGCC TGTTGGCCTC GGTGTCGCGG CTGAAGAACG AGCTCATCGA CCCGGACGCC GCGATGGCGG CGGTGGAGAC GCCGCACCAC CGCACCGTCG CCGAGGCCTA CAAGCGCTAC GACGAGCGGC TGCGGGCGGC GCACGCTCTC GACTTCGACG ACATCATCGG GCACACCGTG CACCTGTTCC GGGCCTACCC GCAGGTGGCC CGGGAGTACC GGCGCCGGTT CCGGCACGTC ATGGTCGACG AGTACCAGGA CACCAACCAC GCCCAGTACG AGCTGGTGCG GGCGCTGGTC GGCGACGACG CGACCGACGA GGAGGTGCCG CCGTCGCAGT TGTGCGTCGT GGGCGACGCC GACCAGTCGA TCTACGCGTT CCGGGGCGCG ACGATCCGCA ACATCCTGGA GTTCGAGCGC GACTTCCCCG ACGCGACGAC GATCCTGCTG GAGCAGAACT ACCGCTCCAC TCAGACCATC TTGGACGCCG CCAACGGCGT GATCCGCAAG AACCCGTCCC GCAAGGACAA GAAACTGTGG ACGGATTCGG GGCCGGGCGC CAAGATCAAG CGTTACGACG CCGACAACGA GCACGACGAG GCGGCCTGGG TCGCCGAGCG CATCGACGCG CTGGCCGACT CCGACGGGGT GAAGCCCCGC GACGTCGCGG TCTTCTACCG CACCAACGCC CAGTCCCGGG TCTTCGAGGA CGCGTTCATC CGGCGCGGCA TCCCGTACAA GGTCGTCGGC GGGGTGCGGT TCTACGAGCG CAAGGAGGTC CGCGACGCGC TGGCCTACCT GCGGCTGACC GTCAACGAGG ACGACATCGT CTCGGGGCGC CGGGTCGTCA ACGTGCCCAA GCGCGGCATC GGCGACCGGG CGGTGGCCTG TGTGGACGCG CTGGCCGACC GGGAGCAGAT CTCGTTCGGG GCGGCGCTGC GCCGGGTCGA CGAGGCCGTG GGCATCTCCA CCCGGGCCGC CGGGGGCGTC AAGAAGTTCG TGGCGGTGCT GGACGCCGCC CGCGAGCGCG TCGACGCCGG CGAGCCGCCC GAGGTGGTGC TGGAGACGCT GCTCAACGAC TCCGGTTACC TGGCCGAGCT GAACGCCTCC ACCGATCCGC AGGACGAGGC GCGGGTCGAC AACCTGCAGG AGCTCGTGTC GGTGGCCCGG GAGTACACCG AGCGGGTCGA GGCCGAAGTC GACGTCGATT CCGACGTCCC GGGTCCGACG GTGGCCAACT TTCTGGAGCA GGTGTCGCTG GTGGCCGACG CCGACCAGAT CCCCGACCCG GAGGCCGACT CCGACGGTGT CGTGACCCTG ATGACGCTGC ACACCGCCAA GGGTCTCGAG TTCGACGTGG TGTTCCTGTC CGGCATGGAC CAGGGCGTGT TCCCGCACGA GCGGTCGCTC GGCGAGGCCA AGGAGATGGA GGAGGAGCGC CGACTGGCCT ATGTGGGCAT CACGCGGGCC CGGCAGCTGC TGCACGTGTC CCGCGCCGAG ACCCGCAGTG CCTGGGGGCA GCCGCAGTTC CATCCGCCGA GCCAGTTCCT GGAGGAGATG CCGGGCGAGC TGCTGGAGGC CGAACGCGCC GTCGCCAAGT CCGCGCTGGG GATCCCCGGC GTCCGGCGGG GCATGTCCAC GGCGGAGCTG ACCACCCCCA AGCGCCCGGC CGGTGACATC CCGGTGCTGT CGGCGGGCGA CCGGGTCTCC CACGACAAGT GGGGGCTGGG CACCGTGGTC GAGGTCAAGG GTTCGGGTCC GCGCGCGCAG GCGTGCGTCG ACTTCGGCGA GGGCCCCAAA TGGCTCGTCG TCCGGCATGC CCCGATTCAG AAGCTCTGA
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Protein sequence | MDSLFETALP ASGSAADSLL DGLNDPQRQA VLHEGPPLLI VAGAGSGKTR VLTQRIAHLV AVRGVHPGEI LAITFTNKAA AEMRDRVSSV VGNRARMMWV LTFHAACMRI LRREHERLNL KSTFTVYDSD DSRRLMQQVA RDMELDKRHT PRGLLASVSR LKNELIDPDA AMAAVETPHH RTVAEAYKRY DERLRAAHAL DFDDIIGHTV HLFRAYPQVA REYRRRFRHV MVDEYQDTNH AQYELVRALV GDDATDEEVP PSQLCVVGDA DQSIYAFRGA TIRNILEFER DFPDATTILL EQNYRSTQTI LDAANGVIRK NPSRKDKKLW TDSGPGAKIK RYDADNEHDE AAWVAERIDA LADSDGVKPR DVAVFYRTNA QSRVFEDAFI RRGIPYKVVG GVRFYERKEV RDALAYLRLT VNEDDIVSGR RVVNVPKRGI GDRAVACVDA LADREQISFG AALRRVDEAV GISTRAAGGV KKFVAVLDAA RERVDAGEPP EVVLETLLND SGYLAELNAS TDPQDEARVD NLQELVSVAR EYTERVEAEV DVDSDVPGPT VANFLEQVSL VADADQIPDP EADSDGVVTL MTLHTAKGLE FDVVFLSGMD QGVFPHERSL GEAKEMEEER RLAYVGITRA RQLLHVSRAE TRSAWGQPQF HPPSQFLEEM PGELLEAERA VAKSALGIPG VRRGMSTAEL TTPKRPAGDI PVLSAGDRVS HDKWGLGTVV EVKGSGPRAQ ACVDFGEGPK WLVVRHAPIQ KL
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