Gene Snas_6084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6084 
Symbol 
ID8887305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6439518 
End bp6440612 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative signal transduction histidine kinase 
Protein accessionYP_003514801 
Protein GI291303523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCTGG CTTTCGTGGT GCTGTCGACG CCGTGGTTCG ACAGCATCGG CGTGCTGTTG 
TACGTCGCGC TGTGGGCGGT GCTGCCCAGT GAGAAGAGCG AGCATCCGTG GCGGGATCGG
CACCAGTGGC CGATCTTCGC GGTGCTGGGG CTGGGGTTGC TCATCTTCGC GATGACGACG
AACCTGACCT CCAGCGGGAT GCTGTTCGGC TGGGTGGCCG CGACGGTGGC GCTGGGCGCC
GGGTTCATCT GGCACCAGAT CAAGCCGGAC CCCGCGATGG TGAAACCCGC GGTGTCGCCC
AAGGGGAAGC GGGACGCGAT CCTGCGGTTG GGCGGCGGCG GGTTGTTGGT CGCCACCGGC
GTGATCGGGA CGATGGTGGT GCTGCTGGGG CTGGACGAGC GCAACGCCGA CAGCATCATC
AACAGCGTCC TGTTCACGGT GATCGCGTTG GCCGGTATGG CGTTGGTGTT CGGGCCGCTG
GCCTGGCGCA CCATGACCCA GCTGCGCAGT GAGCGCGAGG CGCGGGTACG GGAGGCCGAG
CGGGCCGACA TCGCCGCGAT GGTGCACGAC CAGGTGCTGC ACACGCTGGC GCTGATCCAG
CGTCGCGCCG GGGACAGCCG CGAGGTGGTG CGGCTGGCGC GCGGGCAGGA ACGGGCGCTG
CGCAACTGGC TGTACAAGCC GGGCGCCGAC GCCGAGGAGA AGCTACAGGC CGCGCTGGAG
GCGGTGTCGG CGGAGGTGGA GGACTCCTTC GCCATCAGCG TGGACGCGGT GGTCGTGGGC
GACTGCGACA TGGACCCGCA CTCGGCGGCG CTGGTGGCCG CAGCCCGGGA GGCGATGGTC
AACGCCGCCA AACACGCCGG AGTCGACAGC ATCTCGCTGT ACGCCGAGGT GGAGCCGGAC
CTGTTGAGCG TGTTCATCCG CGACCGTGGC GCGGGTTTCG ATCCGGACGA CGTGGACGCC
GACCGGCACG GCGTCCGTGG TTCGATCATG GACAGGATGC TGCGGCACGG CGGCAAGGCC
GAGGTGCGCA GTACCGTCGG CGAAGGCACC GAGGTGCGGT TGCACATGCC ACGCGGCCAG
GAGGACAAAC GATGA
 
Protein sequence
MRLAFVVLST PWFDSIGVLL YVALWAVLPS EKSEHPWRDR HQWPIFAVLG LGLLIFAMTT 
NLTSSGMLFG WVAATVALGA GFIWHQIKPD PAMVKPAVSP KGKRDAILRL GGGGLLVATG
VIGTMVVLLG LDERNADSII NSVLFTVIAL AGMALVFGPL AWRTMTQLRS EREARVREAE
RADIAAMVHD QVLHTLALIQ RRAGDSREVV RLARGQERAL RNWLYKPGAD AEEKLQAALE
AVSAEVEDSF AISVDAVVVG DCDMDPHSAA LVAAAREAMV NAAKHAGVDS ISLYAEVEPD
LLSVFIRDRG AGFDPDDVDA DRHGVRGSIM DRMLRHGGKA EVRSTVGEGT EVRLHMPRGQ
EDKR