Gene Snas_6083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6083 
Symbol 
ID8887304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6438038 
End bp6439237 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content72% 
IMG OID 
Productphage shock protein C, PspC 
Protein accessionYP_003514800 
Protein GI291303522 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGG AAACCACCGC CCCGCCGAGC ACCGGCGGCC GCGCGGCACG CTTCGGTCTG 
ATCCGCTCGG CCGAGGACCG CAGGATCGCG GGCGTCGGCG CCGCCCTCGG ACGCGCCACC
GGCACCGACC CGCTGCTGTG GCGGGTGCTG CTGGCCGTCC TGACGCTGTT CGCCGGGGCC
GGGCTGGTGC TCTACCTGCT GTGCTGGCTG GCGTTCCCCG CCGAAGGCGA CCAGACCTCG
CCGTTCGGGG CGATGGTGTC GACGAAGCGC TCCAGCACCT CCCGCGTCGT CACGGTGCTG
CTGGGACTGG GCGCGGTCCT GGTCGCGATC ATGACCTTCA TCAGCACCAA CGGCCGCCCG
TTCCTGGTGT TCGCGTTCAT CGCGGCGCTG GTGGTGGTGC TGGCCCGGCG CAAGGGCACC
GAACCCGTCG CCGTCGAACC CGAGACCCCG CCCGCCAAGA CCTACGCCGA CGAGTACGCC
GCGCCGTTCG CCCCGCACGG CCCCTACGCC AACCGCACCC TCGAACTCCC GGCCGAGTCC
CCGCCGCCCC CGCCCCCGCC CGCTCCGCCA CCGGCCCCGC GCCAGCGCCC GGAACGCTCC
TCGCTGGGCC TGGTGACGTT CTGCCTCGTG GTGATCGTCA TCGGCGGCGC CGCGATCCTG
GACATGCTGG GCGCCAAGAT CCCGCTGGGC TCCACGATCG CGGTGGCGCT GCTGATCTGC
GGCGGCGGCC TGCTGCTGGG CACCTGGTGG GGCCGCGGCC GCGGCCTGAT CCTGCTCGGC
GTCGTGCTGT CGATCAGCCT GGCCGGGGTC TCGATCCTCG GGCAGAACCT GCCGACCGTC
CCGTTCTCGT CCCAGTACAC GCAGGTCGTC GAGGTGGACG ACATCCCCTC ACAGCTGACC
GCCAACCTCG GCGAGTCCGG GCTGGACCTG TCCGGCGTCG ACTTCGCCGA CGACGACCGG
GCCACCCTGT CGGTCAACAT CTGGACCGGC ACCGCCACCA TCCTGGTCCC CGAGAACCTC
GACGTCATCG TCAACGCGGA CTTCCAGCGC AGCACGGTAA CCGTCGACGG CGAACAGATC
GACCAGGACG GCGTCCGCTG GAACCGCGGC TACGAATCCC TCGGCCCGGA CGGCAAGGGC
GGCGGCACCC TCGTCGTCAA CGCCGTCGTC GAGTCGGGGA GTCTGGAGAT CGAGCGATGA
 
Protein sequence
MTEETTAPPS TGGRAARFGL IRSAEDRRIA GVGAALGRAT GTDPLLWRVL LAVLTLFAGA 
GLVLYLLCWL AFPAEGDQTS PFGAMVSTKR SSTSRVVTVL LGLGAVLVAI MTFISTNGRP
FLVFAFIAAL VVVLARRKGT EPVAVEPETP PAKTYADEYA APFAPHGPYA NRTLELPAES
PPPPPPPAPP PAPRQRPERS SLGLVTFCLV VIVIGGAAIL DMLGAKIPLG STIAVALLIC
GGGLLLGTWW GRGRGLILLG VVLSISLAGV SILGQNLPTV PFSSQYTQVV EVDDIPSQLT
ANLGESGLDL SGVDFADDDR ATLSVNIWTG TATILVPENL DVIVNADFQR STVTVDGEQI
DQDGVRWNRG YESLGPDGKG GGTLVVNAVV ESGSLEIER