Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6083 |
Symbol | |
ID | 8887304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6438038 |
End bp | 6439237 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | phage shock protein C, PspC |
Protein accession | YP_003514800 |
Protein GI | 291303522 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGG AAACCACCGC CCCGCCGAGC ACCGGCGGCC GCGCGGCACG CTTCGGTCTG ATCCGCTCGG CCGAGGACCG CAGGATCGCG GGCGTCGGCG CCGCCCTCGG ACGCGCCACC GGCACCGACC CGCTGCTGTG GCGGGTGCTG CTGGCCGTCC TGACGCTGTT CGCCGGGGCC GGGCTGGTGC TCTACCTGCT GTGCTGGCTG GCGTTCCCCG CCGAAGGCGA CCAGACCTCG CCGTTCGGGG CGATGGTGTC GACGAAGCGC TCCAGCACCT CCCGCGTCGT CACGGTGCTG CTGGGACTGG GCGCGGTCCT GGTCGCGATC ATGACCTTCA TCAGCACCAA CGGCCGCCCG TTCCTGGTGT TCGCGTTCAT CGCGGCGCTG GTGGTGGTGC TGGCCCGGCG CAAGGGCACC GAACCCGTCG CCGTCGAACC CGAGACCCCG CCCGCCAAGA CCTACGCCGA CGAGTACGCC GCGCCGTTCG CCCCGCACGG CCCCTACGCC AACCGCACCC TCGAACTCCC GGCCGAGTCC CCGCCGCCCC CGCCCCCGCC CGCTCCGCCA CCGGCCCCGC GCCAGCGCCC GGAACGCTCC TCGCTGGGCC TGGTGACGTT CTGCCTCGTG GTGATCGTCA TCGGCGGCGC CGCGATCCTG GACATGCTGG GCGCCAAGAT CCCGCTGGGC TCCACGATCG CGGTGGCGCT GCTGATCTGC GGCGGCGGCC TGCTGCTGGG CACCTGGTGG GGCCGCGGCC GCGGCCTGAT CCTGCTCGGC GTCGTGCTGT CGATCAGCCT GGCCGGGGTC TCGATCCTCG GGCAGAACCT GCCGACCGTC CCGTTCTCGT CCCAGTACAC GCAGGTCGTC GAGGTGGACG ACATCCCCTC ACAGCTGACC GCCAACCTCG GCGAGTCCGG GCTGGACCTG TCCGGCGTCG ACTTCGCCGA CGACGACCGG GCCACCCTGT CGGTCAACAT CTGGACCGGC ACCGCCACCA TCCTGGTCCC CGAGAACCTC GACGTCATCG TCAACGCGGA CTTCCAGCGC AGCACGGTAA CCGTCGACGG CGAACAGATC GACCAGGACG GCGTCCGCTG GAACCGCGGC TACGAATCCC TCGGCCCGGA CGGCAAGGGC GGCGGCACCC TCGTCGTCAA CGCCGTCGTC GAGTCGGGGA GTCTGGAGAT CGAGCGATGA
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Protein sequence | MTEETTAPPS TGGRAARFGL IRSAEDRRIA GVGAALGRAT GTDPLLWRVL LAVLTLFAGA GLVLYLLCWL AFPAEGDQTS PFGAMVSTKR SSTSRVVTVL LGLGAVLVAI MTFISTNGRP FLVFAFIAAL VVVLARRKGT EPVAVEPETP PAKTYADEYA APFAPHGPYA NRTLELPAES PPPPPPPAPP PAPRQRPERS SLGLVTFCLV VIVIGGAAIL DMLGAKIPLG STIAVALLIC GGGLLLGTWW GRGRGLILLG VVLSISLAGV SILGQNLPTV PFSSQYTQVV EVDDIPSQLT ANLGESGLDL SGVDFADDDR ATLSVNIWTG TATILVPENL DVIVNADFQR STVTVDGEQI DQDGVRWNRG YESLGPDGKG GGTLVVNAVV ESGSLEIER
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