| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6064 |
|---|
| Symbol | |
|---|
| ID | 8887285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6418362 |
|---|
| End bp | 6420089 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003514781 |
|---|
| Protein GI | 291303503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCT CCCTGAAGCT CCCCGTGTGG TTCGAAGCGC CCGCCGAACC GATCCGCGTC
GCCCCGATCC ACGTCGACGC GTCGACCACC CCGCGCCGAC TCGCCTTGCG CACCATCATG
GCCGCGCGCC GCTACACCGT CCCCGGAGCG CTGTTGACCA TCGGGCACCA GCTCGGCGAG
GCACTGGTGC CGGTCATCAT GGGTCTGGCC ATCGACCGGG CTCTGGCCAC AGGGGACGTC
GGCCAGCTGC TGCTGTGGGT GGCGCTTCTG GGCGTGAACT TCGCGATGCT GTCCTACAGC
TACCGGTTCG GGTCCCGGGT CTCCTACCTC GGCATGCAGG CGATCCAGCA CCACCTGCGC
ACCCGGGTCA CCGACCGGCT GCTGGCGCCG CGCAACGGCG ACAAGGCCAC CCTGCCGGGG
GCGTCGCTGT CCATCGCGAC CTCCGACGTG CTGCGGCTGT CCACACTGGT GGCCATCGGT
GTCTACCCGG TCGGGATGTT CGCGGGCGTG ATCTTCTGCG CGGTGGTGCT GCTGACGATC
TCGTGGCCGC TCGGCCTGGC CGTCCTCATC GGCACCCCGC TGCTGCTGTT CCTGCTGGAC
AAGGCGGACG GGCCGCTGCG CCGCCGTACC GAGAAGCAGC AGGAGCTGGC CGCCGACGCC
GCCGGCAACG CCGCCGATCT CATCACCGGG TACCGGGTCA TCAAGGGCAT CGGGGCCGAA
ACCGAAGCCG CGCAACGGTA TCTGCGCAGC AGCCAGGAGG CGCTGGACGC GACGCTGCGC
GCCAAGACCG CCCAGGGCTT CTACACCGGC TCCACCAACC TGGTCACCGG CCTGTTCATC
GCGGCGCTGG CCGTGGCGGC CGGGATCTTC GCCCTCAACA AGCAGCTCAG CATCGGCCAG
CTCATCACCG TCGTCGGCCT CACCCAGTTC ATCATGAGCC CGTTGCAGGG CCTGGCCGGA
ATCGTGGCCG CGTTCTGGCC GCCCGGCCTG GCCTCGGCGG GCCGGATCCT GCCGGTACTG
CGAGACTCCA CAGCGGAGGG TTCCGACGAG GCCGACGAGC TCGCGACCAC CGTCGCGAAG
CCGGAGACCG GTCTGGAGTT CGCCGCGGTG ACGGCGGGAG CGTTGCGGGA CTTCAGCCTG
CGGGTCGAGC CGGAGGAGTT CGTCGGCGTC GCCGCCGAGG GCGAGACCGC CCGGGTCCTG
ACCGAACTGC TGTCGCTGCG CCGCGAACCC GAATCCGGGG AGCTGACCTT CGACGGCGAG
CCGCTGGCGA CCGCCGATCC CGAGGCGATG CGGCGCCGGA TCCTGGCGGC CCCGCACTCG
GCCGACCTGT TCGACGGCAC CATCCGCGAC AACGTCGCGC TGGCGGGAGC CGACCGGGTC
GAGGCGGCCC TGGACGCGTC CGGCTGCCGC GAGTTCATCG ACGTCCTGCC CGACGGCCTC
GACACCGTCG TCGGCGAGGG CGGCACCCGG TTGTCGGGCG GCCAACGACA GCGCGTCGCG
CTGGCCCGGG CACTGGCGCG ACCCGTGCCG CTGCTGGTGC TGCACGACCC GACCACCGCC
GTGGACTCGG TGACCGAGGC CGGAATCGCC GAACGGCTCG CGAAAGTCCG CGATGGACTG
GCGACGCTCG TCATCACCTC GTCCCCGGCA CTGCTGGCCG CGTGCGACCG CGTCGTGCGG
CTCGACGAGG CGGCCGACGC CAGCCCCCAC CCCCAGGAGA ACCCGTGA
|
|---|
| Protein sequence | MKPSLKLPVW FEAPAEPIRV APIHVDASTT PRRLALRTIM AARRYTVPGA LLTIGHQLGE
ALVPVIMGLA IDRALATGDV GQLLLWVALL GVNFAMLSYS YRFGSRVSYL GMQAIQHHLR
TRVTDRLLAP RNGDKATLPG ASLSIATSDV LRLSTLVAIG VYPVGMFAGV IFCAVVLLTI
SWPLGLAVLI GTPLLLFLLD KADGPLRRRT EKQQELAADA AGNAADLITG YRVIKGIGAE
TEAAQRYLRS SQEALDATLR AKTAQGFYTG STNLVTGLFI AALAVAAGIF ALNKQLSIGQ
LITVVGLTQF IMSPLQGLAG IVAAFWPPGL ASAGRILPVL RDSTAEGSDE ADELATTVAK
PETGLEFAAV TAGALRDFSL RVEPEEFVGV AAEGETARVL TELLSLRREP ESGELTFDGE
PLATADPEAM RRRILAAPHS ADLFDGTIRD NVALAGADRV EAALDASGCR EFIDVLPDGL
DTVVGEGGTR LSGGQRQRVA LARALARPVP LLVLHDPTTA VDSVTEAGIA ERLAKVRDGL
ATLVITSSPA LLAACDRVVR LDEAADASPH PQENP
|
|---|
| |