Gene Snas_6054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6054 
Symbol 
ID8887275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6408354 
End bp6409079 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content69% 
IMG OID 
ProductLysozyme 
Protein accessionYP_003514771 
Protein GI291303493 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGT CGGCTCCGGG ATCGCGATGG CTCAGGGGTT TCCTGGTGAC AGCGGCGGCA 
TTGTCGCTGA TCGCGGCGCC CACACCCGCG TCCGCCTCCG CCACGGTGAA GGGCATCGAC
GTCAGCGACT CCCAGCCCAC CGTGAACTGG CAGGACGCGA AGGCCAACGG CGTCGCGTTC
GCCTACATCA AGGCCACCGA AGGCGCCGAC TACCGCAGCC CGCTGTTCGG CTCACAGCAC
GCGGGCGCGT CCAACGCCGG ACTGATCCGG GGCGCCTACC ACTTCGCCCG CCCCGACCAG
TCGTCCGGCG CCGCGCAGGC CGAGCACCTG CTGGCCAACG GCGGCAACTG GATCCCGGGC
GGAATGACAC TGCCACCGGC GCTCGACGTC GAACCCAACC CCGACGGGCC ACCCTGCTAC
GGCCTGTCCC AGCAGTCGAT GGACGGCTGG ATCCGCGACT TCTCCGACAC GGTCCACTCA
CGCATCGGCC GGTACCCCGT CATCTACACC ACCACCAAAT GGTGGCAGCG CTGCACCGGC
AACACGGCCT TCTTCGGCGA CATCAACCCA CTGTGGATCT CGCAGTACGC GCCCACCGTC
GGCTCGCTGC CGTCCGGCTG GATCTCCCAC AGCTTCTGGC AGCACAGCGA CCACGGCGCC
GTCCCCGGCA ACCAGAACCT GTGGAACGGC GACCTGGCCA GCCTCACCCG CTTCGCCGAC
GGCTGA
 
Protein sequence
MATSAPGSRW LRGFLVTAAA LSLIAAPTPA SASATVKGID VSDSQPTVNW QDAKANGVAF 
AYIKATEGAD YRSPLFGSQH AGASNAGLIR GAYHFARPDQ SSGAAQAEHL LANGGNWIPG
GMTLPPALDV EPNPDGPPCY GLSQQSMDGW IRDFSDTVHS RIGRYPVIYT TTKWWQRCTG
NTAFFGDINP LWISQYAPTV GSLPSGWISH SFWQHSDHGA VPGNQNLWNG DLASLTRFAD
G