Gene Snas_6053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6053 
Symbol 
ID8887274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6407299 
End bp6408342 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content67% 
IMG OID 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003514770 
Protein GI291303492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT CCGCCCCGCT CAGCGCCGTG ATCGCCACGG CACTGCTGTT CAGCCTGCCC 
ACCCCGGCCG CCGCGTCCGG CCCCGAACGC CGCTTCGACC TGCAAGCCCA CCGTGGCGGC
CTGGGGCTGG TCGTGGAGAG CACGCTGCCC GCCTTCGCCA ACGCCCTGGA ACTGGGCGTC
AGCACCCTGG AACTCGACGT CCAGATCACC CAGGACGGGC AGGCCGTCAT CACCCACGAC
CGCAAGGTCT CGGGCGGCAA GTGCCTCGAC ACCGGCCCGG CCACCCCCGG CGACCCGGAG
TACCCGTACG TCGGCAAGTA CATAAAGGAC TTGACCCTCG AACAGGTCCA CACACTCGAC
TGTGGGACGT TGACTCAGCC GCAGTTTCCG GGCCAGGAAG CCCGCCCCGG TGAGCGGATG
CCGCTGTTGA GCGAGGTCTT CGACCTGGTC CGCGAGTACC GCGCCAAGCA GGTGAAGCTG
AACATCGAGA CCAAGGTGGA GGCGGGCGCC CCGCACGAGA CCGCGCCCCG CGAACAGTTC
GTCGAGGTGG TCGCGGACGA GATCGAGGCG GCCCACATCG GCCGTCAGGT CTCGATCCAG
AGCTTCGACT GGGGCGCGCT GAAACTGATG GGCGAACGGT CGCCCCGGCT TCCGCTGTCG
GCGCTGACGA ACTACGACTT CCTCCAGGTC GGTAAGCCGG GCGCCTCGCC GTGGCTGGGC
GGACTGGACA TCGACGACTT CGACGGTGAC CCGATCGCGG CGATCAAGAC CTTCGACGCC
GACGTCTTCT CCCCGGTCCA CGGCTTTCCC CAGGGCGGCA CGGTCAACGA CCCCGACTAC
AAGCCCTACG TGACGTCCGA AATGGTGGAA CACGCGCACG ACAACGACAT CAAGGTCGTC
GTGTGGACGG TGGACGACAA GGACACCATG AACAAGCTCA TCGACGACGG GGTGGACGGC
ATCATCACCG ACTACCCGGA CCGGCTGCGC GAGGTGATGG CGGCGCGGGG CTTCAATCTG
CCCAAGCCGT ATCACCGCCC CTAA
 
Protein sequence
MKKSAPLSAV IATALLFSLP TPAAASGPER RFDLQAHRGG LGLVVESTLP AFANALELGV 
STLELDVQIT QDGQAVITHD RKVSGGKCLD TGPATPGDPE YPYVGKYIKD LTLEQVHTLD
CGTLTQPQFP GQEARPGERM PLLSEVFDLV REYRAKQVKL NIETKVEAGA PHETAPREQF
VEVVADEIEA AHIGRQVSIQ SFDWGALKLM GERSPRLPLS ALTNYDFLQV GKPGASPWLG
GLDIDDFDGD PIAAIKTFDA DVFSPVHGFP QGGTVNDPDY KPYVTSEMVE HAHDNDIKVV
VWTVDDKDTM NKLIDDGVDG IITDYPDRLR EVMAARGFNL PKPYHRP