Gene Snas_6036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6036 
Symbol 
ID8887257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6391237 
End bp6393027 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514753 
Protein GI291303475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGC TTGCGAACGC TCTGTCCCCG TACCTGCGAC AGCACGCCGG GAACCCGGTG 
GAGTGGTATC CGTGGGGGGA GGAGGCGTTG GCCGAGGCGA AGCGGCGGCA GGTGCCGTTG
TTGATCTCGG TGGGGTACGC CGCTTGTCAC TGGTGTCATG TGATGGCCCA TGAGTCGTTC
GAGGATGACG AGGTGGCGGC CCGGGTCAAT GAGATGTGTG TTCCCGTGAA GGTGGACCGG
GAGGAGCGGC CGGATATCGA TGCCGTCTAT ATGAACGCGA CGGTGGCGTT GACCGGGCAG
GGCGGATGGC CCATGACGGT GTTCGCCACG CCGGAGGGGA CGCCGTTTTT CGCGGGTACG
TATTTTCCGC GTGAGCATTT TTTGCGGTTG TTGGACGCTG TTGATGAGGC GTGGACCAAT
AAGCGGGAAG AGGTTGTGGC GCAGGGGAAC ACGATTGTGG AGGCGTTGGC CTCGGCCGGG
CCGAAGCTGG CTGATGTGAC CGAGGCTTGT CCGATCGGGG AGCCCTGTCC GCCCCGGCCG
CCGTTGGGGG CTGCGGTGTT GGGGGACATG GTGGCGGCGA TTCAGGGGGC GTATGACGAG
CGCAATGGTG GGTTCGGGGG TGCGCCGAAG TTCCCGAATC AGCCGGTGCT GGCGTTTCTG
TTGGAGTGGT ACCGGGAGAA CCCGGATGCG GAGACCCGGA AGGTGTTGCG GCACACCGCG
AGTCGGATGG CCCGGGGTGG GATGTACGAC CAGTTGGGTG GGGGGTTCGC GCGGTACAGC
GTGGATGCCA GTTGGACGGT GCCGCACTTC GAGAAGATGT TGTACGACAA CGCGTTGCTG
TTGGACACGT ATGCGGGGTT GGGTGGGGTT ACCGGGGAGG AGTTCTTCGG GCGGGTCGCC
GAGGAGACCG CTCGGTTTGT TGTGGAGGGT CTGGGGACGG CTGAGGGCGG GTTCGCGTCC
GCTTTGGATG CTGATACTGA GGGGGTCGAG GGGTCGACCT ATGTGTGGAC GCCTCGGCAG
TTGCGGGATG TGTTGGGGGA GGACGACGGG GAGTGGGCAG CGCATGCCTT CGCGGTGTCG
GAAGGTGGGA CGTTCGAGCA CGGGACGAGC GTGTTGCAGT TGCCGGTGGA TCCGGAGGAC
ATGAAGCGGT ACGCGGATGT CAAGGCGCGG TTGCTGACGG CGCGGGGGCA GCGGGCGCAG
CCGGAGCGGG ATGACAAGGT CGTGGCCTGC TGGAACGGGC TGGCGATCTC GGCGTTGACC
CGGTACGCGC GGGAGTTTGA GGTGCCTTGG GCGGAGGCCG CGGCGGACAG GGCGGCGCGG
TTGTTGGCCG AGGTGCATAC TGTGGACGGC CGGTTGCGGC GGGTTTCGCG GGATGGGGAA
GTCGGTGCGG CCGTGGGGAT CTTGGAGGAC TACGGTGCGG TGGCGAAGGC GTACCTGGAT
CGTTGGGGGG CGACGGCGGA CGAGGTGTGG CTGGAGCGGG CGGCTGAGTT GGTCGGGGTG
ATCGTGGACC AGTTCACCGA CGAGACCGGC GCGTTGCACG ACACGGCGGC GGACGCGGAG
ACGTTGGTGA CTCGGCCCGC CGATCCGACC GACGGGCCGA CTCCGTCGGG GTGGGCGTTG
GCGGCTTCGG CGTTGTTGGC TTACGGGAAT GAGACCGGGC GGGAGGAGTA CCGGGATGCC
GCTTGGCGGG CGGTGGCCTT GGCCGAGCCG CTGTTGACCG AGCATCCTCG GTTTACCACC
GGGTTGGCGG CGGTGGCGTT GCGGTTGGCC GAAACGGAGA GTGAGAGTTA G
 
Protein sequence
MNRLANALSP YLRQHAGNPV EWYPWGEEAL AEAKRRQVPL LISVGYAACH WCHVMAHESF 
EDDEVAARVN EMCVPVKVDR EERPDIDAVY MNATVALTGQ GGWPMTVFAT PEGTPFFAGT
YFPREHFLRL LDAVDEAWTN KREEVVAQGN TIVEALASAG PKLADVTEAC PIGEPCPPRP
PLGAAVLGDM VAAIQGAYDE RNGGFGGAPK FPNQPVLAFL LEWYRENPDA ETRKVLRHTA
SRMARGGMYD QLGGGFARYS VDASWTVPHF EKMLYDNALL LDTYAGLGGV TGEEFFGRVA
EETARFVVEG LGTAEGGFAS ALDADTEGVE GSTYVWTPRQ LRDVLGEDDG EWAAHAFAVS
EGGTFEHGTS VLQLPVDPED MKRYADVKAR LLTARGQRAQ PERDDKVVAC WNGLAISALT
RYAREFEVPW AEAAADRAAR LLAEVHTVDG RLRRVSRDGE VGAAVGILED YGAVAKAYLD
RWGATADEVW LERAAELVGV IVDQFTDETG ALHDTAADAE TLVTRPADPT DGPTPSGWAL
AASALLAYGN ETGREEYRDA AWRAVALAEP LLTEHPRFTT GLAAVALRLA ETESES