Gene Snas_6035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6035 
Symbol 
ID8887256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6390629 
End bp6391240 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003514752 
Protein GI291303474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGC CCAAGACCGA CGGCCCCGGC CGCCCCCGCG ATCCGGCGGC GGACAAGGCG 
ATCCTGCGCG CGGCCATCGA CCTGCTCGTC GAACGCGGCG TCGACCAGAC CAGCATCGAG
CAGATCGCCA AGCGCGCGGG CGTCGCCAAG GTAACCGTCT ACCGCCGCTG GCGCACCAAG
GAAGACCTGT TCGCCCAAGC GATCGAGACC GCCCGCCAGG ACATCCCCAA CACGGCCGAC
GCCGACCGCC CCTCCGAAGC CCTCCCCCAG GTCATCGCCG ACCTCCTCCC CCGCTGGGGC
CAAGTGCTCG CCGAACCCCG CTTCCGGGCC CTGACCGCCC GGCTACTCGG CGCGGGCCCC
AGCCACCCCA AACTGCTGGA CGCCTACCGC CGCCACCACG TCCAACCCCG CCGCGAACTG
GCCCGAGCGG CCATGATCCA AGCGCAGGCC GACGGCGTGC TGTCACCGTC CGCCGATGTG
GACATGCTCA TCGACATGAT GACCGGAGCC ATCATGCAGC ACCTACTCCT AGAACCCGAA
CCGTTGCACC CCAAGGACAT CAGCGACTAC CTACGCCGAC TCCTCCAACA AGCCGGGTTC
ACCATCGCCT AA
 
Protein sequence
MTAPKTDGPG RPRDPAADKA ILRAAIDLLV ERGVDQTSIE QIAKRAGVAK VTVYRRWRTK 
EDLFAQAIET ARQDIPNTAD ADRPSEALPQ VIADLLPRWG QVLAEPRFRA LTARLLGAGP
SHPKLLDAYR RHHVQPRREL ARAAMIQAQA DGVLSPSADV DMLIDMMTGA IMQHLLLEPE
PLHPKDISDY LRRLLQQAGF TIA