Gene Snas_6031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6031 
Symbol 
ID8887252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6382202 
End bp6383011 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514749 
Protein GI291303471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.415177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAT TCCCCTTCCC CTCCCGGCTA CGGCTGGCGG TGATCGCGCT GGCCGGCTGC 
ATACGTGGTA TGGTTCATGT GTTCGTATTG TGGCTGCTAA GTCACTACAT GGACCTACCG
CAGGGTATGC GGGACGTTAA GCCTGTGGAG CCGCATATAA GACCACACGT GATGTGGCAG
GTGGCGATGA AGCAGGAACC CACCGAGGCG TCTTTAGCGA TGTGGCCGCA AGGTTGTACG
GGAGGCGCAG TAGGAATCGC TCCATTGCGG GGCGAGGATG CCAAGGCAAG GTCGTGTTCC
TCGAACACTC AAATGGTGCC CCGTCGATCG ACTGGCGGGG TTACCAAACA GCTTCCTCAC
TACGAGCAGC GCACCGGCGG TCACCTCGGC ACCGTCGAGG AGATTTACCT CAACAACGAG
AAGATCTACT ACTACGGCGA CAAGAGCTAC ACCAGCCTCA ACGGCTGCGA CGGCTCCAGC
CCGTACACGC CGCAGCAGGT CTGCGGTTCC GGCTACAACG AGCTGGAATC GCGAGAACTG
AAAGAAGGCG ACACATCGCT GGGCAAGGTG CACCTCATGG CCGACGCCAG CGGCTCGAAG
TGCGTCGCGA CCCTGAAGTA CGTCTCCGTC GGACAGGCTT CGGCGGTGTC GGCCTACGTC
GAACCCGAAG GCGGCACCCG CACCAGCGAC GCCGGTGACT TCAAGTACTA CGCCGGACCG
GCGACCCAGC CAGCGGCGGG CAAGTGCGTC CGCTGGGGCG GTTCAGTCGG CGGCGTCGGC
TTCGACGCCG AACCTGGGCA CTGCGACTGA
 
Protein sequence
MTRFPFPSRL RLAVIALAGC IRGMVHVFVL WLLSHYMDLP QGMRDVKPVE PHIRPHVMWQ 
VAMKQEPTEA SLAMWPQGCT GGAVGIAPLR GEDAKARSCS SNTQMVPRRS TGGVTKQLPH
YEQRTGGHLG TVEEIYLNNE KIYYYGDKSY TSLNGCDGSS PYTPQQVCGS GYNELESREL
KEGDTSLGKV HLMADASGSK CVATLKYVSV GQASAVSAYV EPEGGTRTSD AGDFKYYAGP
ATQPAAGKCV RWGGSVGGVG FDAEPGHCD