| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6028 |
|---|
| Symbol | |
|---|
| ID | 8887249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6379100 |
|---|
| End bp | 6379783 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003514746 |
|---|
| Protein GI | 291303468 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.497989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTGC TGATCGTCGA GGACGAGCCC TACCTGGCCG AAGCGGTGCG CGACGGTCTG
CGGCTGGAGG CCATCGCCGC CGACATCGCG GGGGACGGTG ACACCGCGCT GGAACTGTTG
AGCGTCAACT CATACGACCT CGCGGTGCTC GACCGCGACA TCCCCGGCCC CTCCGGCGAC
GAGGTCGCGC GCTGGATCGT CGACTCCGGC AGCGGCATCC CGATCCTCAT GCTCACCGCG
GCCGACCGCA TCGACGACAA GGCCACCGGT TTCGAGCTCG GCGCCGACGA CTACCTCACC
AAACCGTTCG CGCTGCGCGA GCTGGTGCTG CGGCTGCGGG CGCTGGACCG CCGCCGGGCC
CGCTCCCGGC CGCCGGTGCG GGAGATCGCG GGGCTGCGGC TGGACCCGTT CCGGCGGGAG
GTGTTCCGCG ACGGCCGCTA TATCGCGCTG ACCCGCAAAC AGTTCGCCGT CCTGGAGGTC
CTGGTCGCCG CCGAGGGTGG GGTCATCAGC GCCGAGGAGC TGCTGGAACG GGCCTGGGAC
GAGAACGCCG ACCCCTTCAC CAACGCCGTG CGCATCACGG TGTCGGCGCT GCGCAAACGG
CTCGGCGAAC CCTGGCTGAT CGCCACCGTC CCCGGAGTGG GATATCGCAT CGACACCGGA
TCGGAGTCCG ATTCCCGTGC GTAG
|
|---|
| Protein sequence | MRVLIVEDEP YLAEAVRDGL RLEAIAADIA GDGDTALELL SVNSYDLAVL DRDIPGPSGD
EVARWIVDSG SGIPILMLTA ADRIDDKATG FELGADDYLT KPFALRELVL RLRALDRRRA
RSRPPVREIA GLRLDPFRRE VFRDGRYIAL TRKQFAVLEV LVAAEGGVIS AEELLERAWD
ENADPFTNAV RITVSALRKR LGEPWLIATV PGVGYRIDTG SESDSRA
|
|---|
| |