Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6027 |
Symbol | |
ID | 8887248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6378436 |
End bp | 6379011 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
Protein accession | YP_003514745 |
Protein GI | 291303467 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.350512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCACA CCGGCACAGC CCGACGAACG TTCGGCGGGA TCGCGTGGAC CGTGATCGTC CTCGCCGTGA TCGTCGCGAC GCTCGTCAAC CAGCCCGGCT CGTCCTCGGC CAGCGGCACG GCGACCGAGG ACGACGGCGC CGTCCCCGAC GGGGTGACGG TCTTCGACAC CGAGTACCCG GCCGTGGCCA ATCTCGACGC CGACCTGCTC GACGCGCTGC GTCGCGCCGC AATCGACGCC GCCGAGGACG GGGTCACCGT CACCGTCAAC AGCGGCTGGC GCTCGCCCGA CTACCAGGAA CAACTGCTCC AGGAGGCGAC CTCGACCTAC GGTTCGGCGG CCGAGGCCGC CCGGTGGGTG GCCACTCCCG ACACATCCCC GCATGTCTCG GGTCACGCGG TCGACGTCGG CCCCGCCGAG GCGGCGGACT GGCTGTCGCG GCACGGCGCG AACTACGGGC TGTGCCAGAT CTACGACAAC GAGCCCTGGC ACTACGAGCT GCGTCCCGAG GCCGCCGCCG ACGGCTGCCC GACGATGTAC CCCGACCCCA CCCACGACCC GAGGATGCGG AACTGA
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Protein sequence | MTHTGTARRT FGGIAWTVIV LAVIVATLVN QPGSSSASGT ATEDDGAVPD GVTVFDTEYP AVANLDADLL DALRRAAIDA AEDGVTVTVN SGWRSPDYQE QLLQEATSTY GSAAEAARWV ATPDTSPHVS GHAVDVGPAE AADWLSRHGA NYGLCQIYDN EPWHYELRPE AAADGCPTMY PDPTHDPRMR N
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