Gene Snas_6027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6027 
Symbol 
ID8887248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6378436 
End bp6379011 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content71% 
IMG OID 
Productpeptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 
Protein accessionYP_003514745 
Protein GI291303467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.350512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCACA CCGGCACAGC CCGACGAACG TTCGGCGGGA TCGCGTGGAC CGTGATCGTC 
CTCGCCGTGA TCGTCGCGAC GCTCGTCAAC CAGCCCGGCT CGTCCTCGGC CAGCGGCACG
GCGACCGAGG ACGACGGCGC CGTCCCCGAC GGGGTGACGG TCTTCGACAC CGAGTACCCG
GCCGTGGCCA ATCTCGACGC CGACCTGCTC GACGCGCTGC GTCGCGCCGC AATCGACGCC
GCCGAGGACG GGGTCACCGT CACCGTCAAC AGCGGCTGGC GCTCGCCCGA CTACCAGGAA
CAACTGCTCC AGGAGGCGAC CTCGACCTAC GGTTCGGCGG CCGAGGCCGC CCGGTGGGTG
GCCACTCCCG ACACATCCCC GCATGTCTCG GGTCACGCGG TCGACGTCGG CCCCGCCGAG
GCGGCGGACT GGCTGTCGCG GCACGGCGCG AACTACGGGC TGTGCCAGAT CTACGACAAC
GAGCCCTGGC ACTACGAGCT GCGTCCCGAG GCCGCCGCCG ACGGCTGCCC GACGATGTAC
CCCGACCCCA CCCACGACCC GAGGATGCGG AACTGA
 
Protein sequence
MTHTGTARRT FGGIAWTVIV LAVIVATLVN QPGSSSASGT ATEDDGAVPD GVTVFDTEYP 
AVANLDADLL DALRRAAIDA AEDGVTVTVN SGWRSPDYQE QLLQEATSTY GSAAEAARWV
ATPDTSPHVS GHAVDVGPAE AADWLSRHGA NYGLCQIYDN EPWHYELRPE AAADGCPTMY
PDPTHDPRMR N