Gene Snas_6018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6018 
Symbol 
ID8887239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6369213 
End bp6371216 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content68% 
IMG OID 
Productacetoacetyl-CoA synthase 
Protein accessionYP_003514736 
Protein GI291303458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.670793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTCGC CGTCACATCT GAGCGAAAGT GAAGGATTCA TGACTGTCGA AAAGCTGTGG 
AGTCCGTCCC CGGATGCCCT GACTTCTACC CGGATGGGCG AATTCATGTC CTGGCTTGGA
GATCAGGGCC GTGGGAACTT CACCGACTAT GCCGGTCTGT GGCAGTGGTC TGTGGACGAA
CCCGGAAGAT TTTGGGCTGA CATATGGCAG TTTTTCGATG TTGGTGAGGT TGCCGAGCCG
CACGAGGCCC TCGCCGACGC CGCGATGCCC GGCGCCAGCT GGTTTCCCGA CCGCACCCTC
AACTACGCCC GCCAGGTGCT GCGCGCCCCC GGCCGCGCCG ACGACGACGT CATCGTCATC
GGACGGTCGG ACTCCCGCGA CGAACTGACG CTGACCGTCG CGCGGCTGCG CGAGCGGGTC
GCGGCCGCCG CGACCGGACT GGACCGGCTG GGCATCGGCC GGGGTGACCG GGTCGCGGCC
TACCTGCCCA ACATCCCCGA GGCGGTCATC CTGTTGCTGG CCTGCGCCAG CCGGGGCGCG
GTCTTCTCCA GCTGCGCGCC CGAGTTCGGC GTCCGCAGCG TCGCCGACCG CTGGAAGCAG
ATCGCCCCGA AGCTGCTGGT CGCCGTGGAC GGCTACCAGT ACGGGAACAA GCACATCGAC
CGTCGCGACG AGGTCGCCGC GCTGCGCACC GAACTGGACA GTCTCGACAA CGTCGTGTCG
CTGTCGTACA CCGGCAACGA CATCCCCGAC GCGCTGTCCT GGTCGGAACT GCTGTCGCAG
CCGGGCGAGC TGACCTTCAC CGACGTGCCC TTCGACCATC CGCTGTACAT CCTCTACTCC
TCGGGCACCA CCGGCCTGCC CAAACCGATC GTGCACGGCC ACGGCGGCAT CACCCTCGAA
CACCTCAAGA TGCTGGCCCT GCACCACGAC CTGGGCCCCG GCGACCGGTT CTACTGGTTC
TGCACCACCG GCTGGATGAT GTGGAACTAC CTGGTCTCGG CCCCGGCGGT GGGCGCCGCG
ATGGTCCTGT ACGACGGCAA CCCCACCCAC CCCGACTTCT CAGCACAGTG GAAGCTTGCC
GCCGAGACCG GCATCACCAA CTTCGGCACC TCGGCGCCGT TCCTGTTGGC CTGCCGCAAG
AACGGGATCG TGCCGCGCGA GGTGGCCGAC CTGTCGCGGC TGCGCGGCGT CGGCTCCACC
GGCTCGCCGC TGCCGCCCGA GGGCTTCGCC TACGTCTACG AGGCGATCGC CCCCGACGCG
ATGCTGACCT CGCTGTCCGG CGGCACCGAC GTGTGCACCG GCTTCGTCGG CGGTGCACCG
CTCGTACCCG TCTACAAGGG AGAGATCGCC TGCCGCTGTC TCGGCTCCCG GGTCGAGGCC
TTCGGTCCCG ACGGCAAACC GGTGCTGGGC GAGACCGGCG AGCTGGTCAT CACCGCGCCG
ATGCCGTCCA TGCCGGTCGG GTTCTGGGGC GACGAGGACG GCTCCCGCTA CCGCGAGGCC
TATTTCGACA CCTACCCGGG CGTGTGGCGC CACGGCGACT GGATCACCAT CACCGACCGC
GGCACCTGCG TCATCACCGG ACGCAGCGAC GCCACCCTCA AACGCGGCGG CGTCCGGCTG
GGAACCAGCG AGTTCTACTC GGTCGTGGAG GCCCTCGACG AAGTCAACGA CTCGCTGGTG
GTGCATTTGG AGGACGACGA GGGCGGGCCG GGCCGGCTGC TGCTGTTCGT CGTCACCGCC
GGGGGCCGCG AGGTCGACGA CGAGCTGCGC AGGACCATCG CGCGGGAACT GCGCGGCAGC
CTGTCGCCGC GACACGTCCC CGACGAGCTG TACGCCGTCC CGGCCGTGCC GCGCACCCTG
TCGGGCAAGA AGCTGGAAAT TCCGGTCAAA CGGATACTGA CCGGTACCCC AATAGCCGAA
GCCGCCGCGA CCGGGGCACT GGCGAACCCG GAATCCCTGG AGGCTTTTCT CGCGTATTCG
TGCCAGGTTG AAAATCACGA CTAG
 
Protein sequence
MGSPSHLSES EGFMTVEKLW SPSPDALTST RMGEFMSWLG DQGRGNFTDY AGLWQWSVDE 
PGRFWADIWQ FFDVGEVAEP HEALADAAMP GASWFPDRTL NYARQVLRAP GRADDDVIVI
GRSDSRDELT LTVARLRERV AAAATGLDRL GIGRGDRVAA YLPNIPEAVI LLLACASRGA
VFSSCAPEFG VRSVADRWKQ IAPKLLVAVD GYQYGNKHID RRDEVAALRT ELDSLDNVVS
LSYTGNDIPD ALSWSELLSQ PGELTFTDVP FDHPLYILYS SGTTGLPKPI VHGHGGITLE
HLKMLALHHD LGPGDRFYWF CTTGWMMWNY LVSAPAVGAA MVLYDGNPTH PDFSAQWKLA
AETGITNFGT SAPFLLACRK NGIVPREVAD LSRLRGVGST GSPLPPEGFA YVYEAIAPDA
MLTSLSGGTD VCTGFVGGAP LVPVYKGEIA CRCLGSRVEA FGPDGKPVLG ETGELVITAP
MPSMPVGFWG DEDGSRYREA YFDTYPGVWR HGDWITITDR GTCVITGRSD ATLKRGGVRL
GTSEFYSVVE ALDEVNDSLV VHLEDDEGGP GRLLLFVVTA GGREVDDELR RTIARELRGS
LSPRHVPDEL YAVPAVPRTL SGKKLEIPVK RILTGTPIAE AAATGALANP ESLEAFLAYS
CQVENHD