Gene Snas_6006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6006 
Symbol 
ID8887227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6357554 
End bp6358762 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content72% 
IMG OID 
Productmannose-6-phosphate isomerase class I 
Protein accessionYP_003514725 
Protein GI291303447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000013531 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0800927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACTG TGGAACTCCT CAACGGAGCG ATTCGGCCGT ACGCATGGGG GTCCCGCACC 
GCGATAGCGG CGCTACAGGG ACGGTCGATG CCCAGCTCAA CGCCCGAGGC CGAGCTGTGG
TTCGGCGCCC ACCCGGCCGA CCCGTCCCGG CTGCCCGACG GCCGTGACCT CAACGAGGCC
ATCGCCAAGG CACCCGAGGC GCTGTTGGGC GCCGAGACGG TCGCCGAGTT CGGCGCCCGG
CTGCCCTACC TGCTGAAGGT GCTGGCCGCC GAACAGCCGC TGTCGCTTCA GGCCCACCCC
GACGCCGACC AGGCCATCGA GGGCTTCACC CGCGAGGACG AGGCCGGGGT GCCGCTGGGC
ACCCCCGAGC GCAACTACGT CGACGCCTTC CACAAGCCCG AGCTGCTGTG CGCCGTCAGC
GAGTTCGAGG CGCTGTGCGG CTTCCGCGAC CCGCAACTGT CCGCCGAGGT CATCGAGACC
CTGGGCGTGC CCGGCCTGGA GTCCATCGTC GCGCTGCTGC GCCAGGACGA CGCCGCGCAG
GGGCTGCGCG AGGCCGTCAC GACGCTGCTG ACGCTGCCCG CCGACCACCG CGAGGAACTG
GTCCGGCAGG CGACCCTGTC GGCCGAGCGG CTCGCCGACA CCGACTCGCC GCACGCGTTC
GACTTCGCCC TGGTCGCCGA CCTGGGCAAG CGCTACCCCA GCGACGCGGG CACCATCGTG
GCGCTGCTGC TGCACCACAT CACGCTGCAA CCCGGCCAGG CGATCTACAT GCCCGCGGGC
AACCTGCACG CCTACCTGCG CGGCGTCGGC GTCGAGCTGA TGGCCGCCAG CGACAACGTG
CTGCGCGGCG GGCTGACCGG CAAGCACGTC GACGTCCCCG AACTCCTGCG CGTGCTGCGC
TTCGAGGTCC TGGGCGACCC CATCTCCCCG GCCCGCGAGG CCGGAGGGGG CATCGTCGAC
TGGCCGGTGC CCAGCCGCGA GTTCCGGCTC TCACGGCTGC GCCTGGAGGC CGACTCGGGC
CAGCGCACCC TGCCGGTCAA CGGCCCCTCG ATCATCCTGT GCTGGTCGGG CCAGATCCGG
CTCGACGACG GGGTGTCACC AATCACCCTC CAGCCCGGCC AAGCGGCTTT CGCCCCGGCC
GACACGCCGA CGATCTACGC TTCCGGCTTC GGCGACAGCT ACTGCGCCGG TCTCGGAACT
GGCCACTGA
 
Protein sequence
MVTVELLNGA IRPYAWGSRT AIAALQGRSM PSSTPEAELW FGAHPADPSR LPDGRDLNEA 
IAKAPEALLG AETVAEFGAR LPYLLKVLAA EQPLSLQAHP DADQAIEGFT REDEAGVPLG
TPERNYVDAF HKPELLCAVS EFEALCGFRD PQLSAEVIET LGVPGLESIV ALLRQDDAAQ
GLREAVTTLL TLPADHREEL VRQATLSAER LADTDSPHAF DFALVADLGK RYPSDAGTIV
ALLLHHITLQ PGQAIYMPAG NLHAYLRGVG VELMAASDNV LRGGLTGKHV DVPELLRVLR
FEVLGDPISP AREAGGGIVD WPVPSREFRL SRLRLEADSG QRTLPVNGPS IILCWSGQIR
LDDGVSPITL QPGQAAFAPA DTPTIYASGF GDSYCAGLGT GH